Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm23860-201ENSMUST00000179446 132 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm27636-201ENSMUST00000184528 122 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm28639-201ENSMUST00000191519 481 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm38334-201ENSMUST00000195060 313 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm44972-201ENSMUST00000206419 406 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm44600-201ENSMUST00000208540 111 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm30674-201ENSMUST00000214523 392 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Mir365-2-201ENSMUST00000083555 112 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 AC131720.1-201ENSMUST00000218629 2132 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm42614-201ENSMUST00000198724 1554 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm45540-201ENSMUST00000209271 3606 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm42484-201ENSMUST00000196075 2104 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm23256-201ENSMUST00000102235 110 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm26140-201ENSMUST00000103807 110 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm7071-201ENSMUST00000120458 462 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm12222-201ENSMUST00000121368 260 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm11229-201ENSMUST00000121993 437 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm14768-201ENSMUST00000122126 678 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm24213-201ENSMUST00000158255 258 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm24734-201ENSMUST00000158860 262 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm23617-201ENSMUST00000175410 95 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm22908-201ENSMUST00000177620 110 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Ang-ps3-201ENSMUST00000177964 433 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm27315-201ENSMUST00000183977 154 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm27952-201ENSMUST00000184748 105 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm28594-201ENSMUST00000187022 661 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm38330-201ENSMUST00000192743 959 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm4859-201ENSMUST00000199625 787 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 LOC667541-201ENSMUST00000223408 278 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Ube2nl-201ENSMUST00000085228 456 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Gm38212-201ENSMUST00000194081 2756 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Trav6d-4Q5R1I0 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm15148-201ENSMUST00000117602 156 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm9078-201ENSMUST00000119126 617 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm12757-201ENSMUST00000119465 800 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm13443-201ENSMUST00000120770 555 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm14387-201ENSMUST00000121827 2055 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm12010-201ENSMUST00000122400 2017 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm16274-201ENSMUST00000139251 592 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm15275-201ENSMUST00000154752 347 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm18505-201ENSMUST00000187360 790 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm18921-201ENSMUST00000221798 366 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm6462-201ENSMUST00000081488 304 ntBASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm23615-201ENSMUST00000082602 65 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms