Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm44650-201ENSMUST00000206929 194 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Gm25592-201ENSMUST00000082635 131 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 AC121942.1-201ENSMUST00000224459 2891 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm5963-201ENSMUST00000143451 236 ntBASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm23829-201ENSMUST00000157392 270 ntBASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm23262-201ENSMUST00000158323 168 ntBASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm26400-201ENSMUST00000175012 85 ntBASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm22633-201ENSMUST00000179834 107 ntBASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm29592-201ENSMUST00000189434 370 ntBASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm37217-201ENSMUST00000194017 3521 ntBASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm12080-201ENSMUST00000119821 1883 ntBASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim41Q5NCC3 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Gm43360-201ENSMUST00000197656 2887 ntBASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Gm24982-201ENSMUST00000104456 132 ntBASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Gm14570-201ENSMUST00000119444 391 ntBASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Gm37836-201ENSMUST00000195875 175 ntBASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Gm22897-202ENSMUST00000197782 127 ntBASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Gm43717-201ENSMUST00000198684 310 ntBASIC9.37□□□□□ -0.91
Trim41Q5NCC3 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 AC123067.1-201ENSMUST00000217711 462 ntBASIC9.37□□□□□ -0.91
Trim41Q5NCC3 AC154515.2-201ENSMUST00000226093 406 ntBASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Gm44220-201ENSMUST00000203784 2487 ntBASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trim41Q5NCC3 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC9.36□□□□□ -0.91
Trim41Q5NCC3 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm8214-201ENSMUST00000172123 351 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm22857-201ENSMUST00000174969 134 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm19498-201ENSMUST00000191128 331 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm37503-201ENSMUST00000192088 319 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm18698-201ENSMUST00000192327 668 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm44757-201ENSMUST00000206373 157 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm45704-201ENSMUST00000212582 403 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 AC158142.1-201ENSMUST00000226721 416 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 CT030238.1-201ENSMUST00000228393 442 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm26439-201ENSMUST00000082592 106 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm22358-201ENSMUST00000082877 122 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm26164-201ENSMUST00000083793 104 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm25188-201ENSMUST00000083913 122 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm37769-201ENSMUST00000193753 2369 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Gm43175-201ENSMUST00000198450 3810 ntBASIC9.36□□□□□ -0.91
Trim41Q5NCC3 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trim41Q5NCC3 AC116726.1-201ENSMUST00000215028 3497 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 AC155167.2-201ENSMUST00000226127 1945 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm22266-201ENSMUST00000104011 138 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm24350-201ENSMUST00000104163 133 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm14823-201ENSMUST00000117698 238 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm7327-201ENSMUST00000120925 652 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm22433-201ENSMUST00000158550 142 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm37817-201ENSMUST00000195276 434 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms