Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 BC051076-202ENSMUST00000199477 2868 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm26474-201ENSMUST00000116762 122 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm5943-201ENSMUST00000119458 459 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm15480-201ENSMUST00000120442 519 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm26028-201ENSMUST00000158660 294 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm38333-201ENSMUST00000193608 604 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm37576-201ENSMUST00000194228 372 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm37987-201ENSMUST00000194999 825 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm34091-201ENSMUST00000200875 604 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm44254-201ENSMUST00000204184 322 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm46146-201ENSMUST00000217483 346 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm8785-201ENSMUST00000220259 487 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm26449-201ENSMUST00000082452 104 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm24622-201ENSMUST00000082619 162 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.89□□□□□ -1.79
Brf2Q3UAW9 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Brf2Q3UAW9 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm24608-201ENSMUST00000104381 136 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm12173-201ENSMUST00000117622 273 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm11429-201ENSMUST00000119089 144 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm12994-201ENSMUST00000119601 447 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm23789-201ENSMUST00000122536 301 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm17377-201ENSMUST00000165184 207 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm28384-201ENSMUST00000189079 463 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm37431-201ENSMUST00000195102 111 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm38154-201ENSMUST00000195444 340 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm43649-201ENSMUST00000196596 391 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm43810-201ENSMUST00000201018 232 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm44076-201ENSMUST00000203072 520 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm29754-201ENSMUST00000206269 358 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm19366-201ENSMUST00000206996 156 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm18597-201ENSMUST00000209519 694 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm7380-201ENSMUST00000211599 466 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm45439-201ENSMUST00000211723 359 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Gm18507-201ENSMUST00000218855 525 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.88□□□□□ -1.79
Brf2Q3UAW9 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Brf2Q3UAW9 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms