Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rnf180Q3U827 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rnf180Q3U827 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm12173-201ENSMUST00000117622 273 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm11512-201ENSMUST00000119669 663 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm23540-201ENSMUST00000157543 164 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm22080-201ENSMUST00000157591 106 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm24289-201ENSMUST00000157629 135 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm3191-201ENSMUST00000167139 346 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm27957-201ENSMUST00000184054 127 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm19694-201ENSMUST00000192364 505 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm10237-201ENSMUST00000078393 273 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm23677-201ENSMUST00000083156 104 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rnf180Q3U827 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.3□□□□□ -1.56
Rnf180Q3U827 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rnf180Q3U827 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm25213-201ENSMUST00000102388 113 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm14575-201ENSMUST00000117210 560 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm25908-201ENSMUST00000157624 98 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm22836-201ENSMUST00000158441 61 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm17060-201ENSMUST00000172394 824 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC5.29□□□□□ -1.56
Rnf180Q3U827 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm23215-201ENSMUST00000178153 121 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Rnf180Q3U827 Mir7676-1-201ENSMUST00000183491 62 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Mir7676-2-201ENSMUST00000183523 62 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC5.29□□□□□ -1.56
Rnf180Q3U827 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.29□□□□□ -1.56
Rnf180Q3U827 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm46312-201ENSMUST00000220961 420 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 AC154532.2-201ENSMUST00000228947 598 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm4987-201ENSMUST00000078326 408 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rnf180Q3U827 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Rnf180Q3U827 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Rnf180Q3U827 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.29□□□□□ -1.56
Rnf180Q3U827 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf180Q3U827 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm7853-201ENSMUST00000100708 478 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 n-R5s219-201ENSMUST00000104328 132 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm12268-201ENSMUST00000118398 442 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm7429-201ENSMUST00000118664 348 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm14793-201ENSMUST00000118739 311 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm12719-201ENSMUST00000118859 241 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm11352-201ENSMUST00000119264 517 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm12891-201ENSMUST00000119358 240 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm14282-201ENSMUST00000119484 240 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm11438-201ENSMUST00000121582 189 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm22960-201ENSMUST00000122517 104 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm22890-201ENSMUST00000158642 144 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm25873-201ENSMUST00000180317 107 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms