Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm16400-201ENSMUST00000116523 1029 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm13664-201ENSMUST00000117304 345 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm10241-201ENSMUST00000117664 286 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm6664-201ENSMUST00000119138 468 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm5060-201ENSMUST00000120072 599 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm12087-201ENSMUST00000121878 258 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm22452-201ENSMUST00000122804 104 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm25559-201ENSMUST00000157182 74 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Snora81-201ENSMUST00000157310 178 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm23905-201ENSMUST00000157568 109 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm20543-201ENSMUST00000174200 726 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm27976-201ENSMUST00000183635 162 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm17954-201ENSMUST00000195893 607 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm44765-201ENSMUST00000206927 601 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 CR974485.1-201ENSMUST00000222408 402 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm19074-201ENSMUST00000218915 1429 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm15312-201ENSMUST00000118827 271 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm11398-201ENSMUST00000120330 320 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm15309-201ENSMUST00000121644 240 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm14766-201ENSMUST00000121689 367 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm14366-201ENSMUST00000121970 730 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm11254-201ENSMUST00000122368 653 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm22733-201ENSMUST00000158094 91 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm22211-201ENSMUST00000158097 156 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm29216-201ENSMUST00000187117 492 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm37353-201ENSMUST00000194497 313 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm42465-201ENSMUST00000197036 492 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm42999-201ENSMUST00000198049 786 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm45081-201ENSMUST00000206281 572 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 AC152951.1-201ENSMUST00000218907 266 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm7093-201ENSMUST00000223004 581 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 AC170810.3-201ENSMUST00000226177 374 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 AC166344.2-201ENSMUST00000226747 374 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 AC116656.1-201ENSMUST00000227040 755 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 AC167192.3-201ENSMUST00000224096 1567 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col28a1Q2UY11 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Gm26002-201ENSMUST00000101915 107 ntBASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Gm13755-201ENSMUST00000118509 305 ntBASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Gm12379-201ENSMUST00000119607 391 ntBASIC4.12□□□□□ -1.75
Col28a1Q2UY11 Gm8757-201ENSMUST00000119660 372 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms