Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.55□□□□□ -1.52
Col6a1Q04857 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a1Q04857 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm21726-201ENSMUST00000179654 392 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm29045-201ENSMUST00000187278 698 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm2497-201ENSMUST00000189539 601 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm31849-201ENSMUST00000220306 375 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm23515-201ENSMUST00000082829 107 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a1Q04857 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a1Q04857 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a1Q04857 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a1Q04857 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Col6a1Q04857 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a1Q04857 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm25565-201ENSMUST00000104605 105 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm12112-201ENSMUST00000117772 231 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm11219-201ENSMUST00000118565 358 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Col6a1Q04857 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm24441-201ENSMUST00000157235 281 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm26350-201ENSMUST00000157531 288 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm23115-201ENSMUST00000158480 108 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm16566-201ENSMUST00000160387 910 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm7925-201ENSMUST00000166690 401 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm2092-201ENSMUST00000178887 639 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm2759-201ENSMUST00000179938 639 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Mir6416-201ENSMUST00000183664 117 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm28468-201ENSMUST00000188536 615 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm37272-201ENSMUST00000193401 488 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm43723-201ENSMUST00000196886 189 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm45651-201ENSMUST00000210857 335 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 AC154328.1-201ENSMUST00000225875 307 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm42639-201ENSMUST00000197061 1871 ntBASIC5.54□□□□□ -1.52
Col6a1Q04857 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a1Q04857 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm24079-201ENSMUST00000104352 132 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm16431-201ENSMUST00000117454 431 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm11971-201ENSMUST00000117715 288 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm15025-201ENSMUST00000118434 418 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm23124-201ENSMUST00000157650 107 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm24857-201ENSMUST00000158061 310 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm25861-201ENSMUST00000158251 109 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm22085-201ENSMUST00000158344 110 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm23016-201ENSMUST00000158431 62 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm22136-201ENSMUST00000158751 268 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm9294-201ENSMUST00000165198 789 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms