Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm18802-201ENSMUST00000186270 888 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm37670-201ENSMUST00000193622 229 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Ighv2-8-201ENSMUST00000193935 262 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm43710-201ENSMUST00000199583 452 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm44074-201ENSMUST00000204562 337 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm45236-201ENSMUST00000208632 229 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 AC164161.1-201ENSMUST00000214076 639 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
Col8a1Q00780 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 AC137117.1-201ENSMUST00000226912 441 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col8a1Q00780 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm25929-201ENSMUST00000082784 107 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col8a1Q00780 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col8a1Q00780 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col8a1Q00780 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col8a1Q00780 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Col8a1Q00780 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col8a1Q00780 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col8a1Q00780 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col8a1Q00780 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm23538-201ENSMUST00000157535 101 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm24289-201ENSMUST00000157629 135 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm24499-201ENSMUST00000158446 104 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm25348-201ENSMUST00000158961 111 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm8161-201ENSMUST00000168739 481 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm22395-201ENSMUST00000177427 96 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm24863-201ENSMUST00000179499 107 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm28097-201ENSMUST00000187333 366 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm29038-201ENSMUST00000191543 678 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm2979-201ENSMUST00000193442 463 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.38□□□□□ -1.71
Col8a1Q00780 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm32308-201ENSMUST00000203053 280 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm45614-201ENSMUST00000209994 721 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm35262-201ENSMUST00000215133 267 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 CT010454.1-201ENSMUST00000225975 265 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col8a1Q00780 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col8a1Q00780 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm22169-201ENSMUST00000083229 107 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col8a1Q00780 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col8a1Q00780 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col8a1Q00780 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col8a1Q00780 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.38□□□□□ -1.71
Col8a1Q00780 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.38□□□□□ -1.71
Col8a1Q00780 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.37□□□□□ -1.71
Col8a1Q00780 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Col8a1Q00780 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Col8a1Q00780 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm14125-201ENSMUST00000113442 680 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm12683-201ENSMUST00000117528 415 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm7657-201ENSMUST00000118851 666 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm15400-201ENSMUST00000118944 601 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm14688-201ENSMUST00000119169 303 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm11822-201ENSMUST00000119177 415 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms