Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm7142-201ENSMUST00000194232 586 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm44059-201ENSMUST00000204048 351 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm20074-201ENSMUST00000208144 484 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm7407-201ENSMUST00000208301 568 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm19987-201ENSMUST00000216339 499 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm9370-201ENSMUST00000222787 609 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 BC051076-202ENSMUST00000199477 2868 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm12268-201ENSMUST00000118398 442 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm14240-201ENSMUST00000120353 546 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm13692-201ENSMUST00000120774 371 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm14977-201ENSMUST00000121626 812 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm12858-201ENSMUST00000121913 208 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm8840-201ENSMUST00000122454 386 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm23633-201ENSMUST00000175293 119 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm7870-201ENSMUST00000184467 616 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm36638-201ENSMUST00000193295 400 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm43704-201ENSMUST00000196164 496 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm25203-202ENSMUST00000200458 216 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm45409-201ENSMUST00000211486 252 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm18899-201ENSMUST00000217663 546 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 AC156559.1-201ENSMUST00000224158 222 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Gm25203-201ENSMUST00000082842 215 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.85□□□□□ -1.95
Nkx3-1P97436 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Nkx3-1P97436 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm6545-201ENSMUST00000217186 1786 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm15231-201ENSMUST00000119174 447 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm11876-201ENSMUST00000120002 269 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm15142-201ENSMUST00000121013 856 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm22226-201ENSMUST00000157355 109 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm26088-201ENSMUST00000157896 131 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm22730-201ENSMUST00000158085 171 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm27427-201ENSMUST00000185134 193 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm37290-201ENSMUST00000195775 339 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm43975-201ENSMUST00000203023 481 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm45063-201ENSMUST00000203726 472 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm19039-201ENSMUST00000204363 575 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Nkx3-1P97436 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Nkx3-1P97436 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 AC141884.1-201ENSMUST00000226327 636 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm23460-201ENSMUST00000083258 109 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.84□□□□□ -1.95
Nkx3-1P97436 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.84□□□□□ -1.95
Nkx3-1P97436 Gm37407-201ENSMUST00000194793 1316 ntBASIC2.84□□□□□ -1.96
Nkx3-1P97436 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC2.84□□□□□ -1.96
Nkx3-1P97436 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Nkx3-1P97436 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Nkx3-1P97436 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Nkx3-1P97436 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Nkx3-1P97436 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Nkx3-1P97436 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Nkx3-1P97436 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms