Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Sox3P53784 Gm3010-201ENSMUST00000198805 448 ntBASIC3.49□□□□□ -1.85
Sox3P53784 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Sox3P53784 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.49□□□□□ -1.85
Sox3P53784 Gm5655-201ENSMUST00000221078 901 ntBASIC3.49□□□□□ -1.85
Sox3P53784 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.49□□□□□ -1.85
Sox3P53784 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.49□□□□□ -1.85
Sox3P53784 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Sox3P53784 Gm25480-201ENSMUST00000083217 133 ntBASIC3.49□□□□□ -1.85
Sox3P53784 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Sox3P53784 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Sox3P53784 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sox3P53784 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Sox3P53784 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Sox3P53784 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Sox3P53784 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.49□□□□□ -1.85
Sox3P53784 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Sox3P53784 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
Sox3P53784 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Sox3P53784 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Sox3P53784 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm12587-201ENSMUST00000120180 427 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.48□□□□□ -1.85
Sox3P53784 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Sox3P53784 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.48□□□□□ -1.85
Sox3P53784 Gm22310-201ENSMUST00000157509 116 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.48□□□□□ -1.85
Sox3P53784 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Sox3P53784 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Sox3P53784 Gm8641-201ENSMUST00000186995 826 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm18505-201ENSMUST00000187360 790 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm20776-201ENSMUST00000189940 700 ntBASIC3.48□□□□□ -1.85
Sox3P53784 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Sox3P53784 Gm42926-201ENSMUST00000200496 697 ntBASIC3.48□□□□□ -1.85
Sox3P53784 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm5358-201ENSMUST00000212814 353 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Sox3P53784 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.48□□□□□ -1.85
Sox3P53784 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Sox3P53784 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.48□□□□□ -1.85
Sox3P53784 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm9765-201ENSMUST00000043170 321 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
Sox3P53784 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sox3P53784 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Sox3P53784 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sox3P53784 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
Sox3P53784 Gm24950-201ENSMUST00000082768 191 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm23971-201ENSMUST00000083317 191 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm23849-201ENSMUST00000083833 191 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm26316-201ENSMUST00000083886 191 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Sox3P53784 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Sox3P53784 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sox3P53784 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Sox3P53784 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Sox3P53784 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
Sox3P53784 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.48□□□□□ -1.85
Sox3P53784 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sox3P53784 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Sox3P53784 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Sox3P53784 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sox3P53784 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Sox3P53784 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.47□□□□□ -1.85
Sox3P53784 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sox3P53784 Gm24014-201ENSMUST00000157728 157 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Gm24976-201ENSMUST00000158972 135 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Gm16490-201ENSMUST00000165299 351 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Sox3P53784 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Sox3P53784 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Sox3P53784 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sox3P53784 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sox3P53784 Gm10925-201ENSMUST00000189941 678 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.47□□□□□ -1.85
Sox3P53784 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.47□□□□□ -1.85
Sox3P53784 Gm44393-201ENSMUST00000197418 138 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Gm42474-201ENSMUST00000201073 505 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Gm44092-201ENSMUST00000204470 258 ntBASIC3.47□□□□□ -1.85
Sox3P53784 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Sox3P53784 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.47□□□□□ -1.85
Sox3P53784 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.47□□□□□ -1.85
Sox3P53784 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Sox3P53784 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Sox3P53784 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Sox3P53784 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Sox3P53784 Gm23628-201ENSMUST00000082464 173 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Gm22829-201ENSMUST00000083771 106 ntBASIC3.47□□□□□ -1.85
Sox3P53784 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Sox3P53784 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.47□□□□□ -1.85
Sox3P53784 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Sox3P53784 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Sox3P53784 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.46□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms