Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox1P53783 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.33□□□□□ -1.56
Sox1P53783 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox1P53783 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox1P53783 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox1P53783 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox1P53783 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sox1P53783 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox1P53783 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Gm12245-201ENSMUST00000117266 357 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Gm15263-201ENSMUST00000121556 642 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Gm13232-201ENSMUST00000121816 632 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Gm14578-201ENSMUST00000122166 391 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Gm23213-201ENSMUST00000122715 313 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.32□□□□□ -1.56
Sox1P53783 Gm23581-201ENSMUST00000158531 63 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox1P53783 Gm27414-201ENSMUST00000185033 381 ntBASIC5.32□□□□□ -1.56
Sox1P53783 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.32□□□□□ -1.56
Sox1P53783 Gm45156-201ENSMUST00000207255 439 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Gm18854-201ENSMUST00000211196 329 ntBASIC5.32□□□□□ -1.56
Sox1P53783 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.32□□□□□ -1.56
Sox1P53783 Gm18016-201ENSMUST00000216119 801 ntBASIC5.32□□□□□ -1.56
Sox1P53783 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox1P53783 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Sox1P53783 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sox1P53783 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox1P53783 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Sox1P53783 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.32□□□□□ -1.56
Sox1P53783 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.32□□□□□ -1.56
Sox1P53783 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sox1P53783 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sox1P53783 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Sox1P53783 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sox1P53783 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.31□□□□□ -1.56
Sox1P53783 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox1P53783 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Gm12693-201ENSMUST00000121965 483 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Gm6956-201ENSMUST00000134724 546 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Gm26348-201ENSMUST00000157528 240 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Gm24504-201ENSMUST00000157679 100 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Gm23078-201ENSMUST00000157848 148 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Gm6632-201ENSMUST00000168425 954 ntBASIC5.31□□□□□ -1.56
Sox1P53783 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.31□□□□□ -1.56
Sox1P53783 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Gm27490-201ENSMUST00000184754 128 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox1P53783 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.31□□□□□ -1.56
Sox1P53783 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox1P53783 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox1P53783 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sox1P53783 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sox1P53783 Gm25937-201ENSMUST00000083912 107 ntBASIC5.31□□□□□ -1.56
Sox1P53783 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sox1P53783 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sox1P53783 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sox1P53783 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox1P53783 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms