Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm24922-201ENSMUST00000158511 102 ntBASIC4.53□□□□□ -1.68
Cux1P53564 Gm4222-201ENSMUST00000165784 470 ntBASIC4.53□□□□□ -1.68
Cux1P53564 Gm19203-201ENSMUST00000174049 939 ntBASIC4.53□□□□□ -1.68
Cux1P53564 Gm18984-201ENSMUST00000193998 1124 ntBASIC4.53□□□□□ -1.68
Cux1P53564 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.53□□□□□ -1.68
Cux1P53564 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cux1P53564 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.53□□□□□ -1.68
Cux1P53564 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.53□□□□□ -1.68
Cux1P53564 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cux1P53564 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cux1P53564 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.53□□□□□ -1.68
Cux1P53564 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cux1P53564 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cux1P53564 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Cux1P53564 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
Cux1P53564 Gm24274-201ENSMUST00000116787 124 ntBASIC4.52□□□□□ -1.69
Cux1P53564 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cux1P53564 Gm25866-201ENSMUST00000158245 112 ntBASIC4.52□□□□□ -1.69
Cux1P53564 Gm3933-201ENSMUST00000195391 439 ntBASIC4.52□□□□□ -1.69
Cux1P53564 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.52□□□□□ -1.69
Cux1P53564 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cux1P53564 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.52□□□□□ -1.69
Cux1P53564 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cux1P53564 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cux1P53564 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cux1P53564 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cux1P53564 Mir344c-201ENSMUST00000103919 92 ntBASIC4.51□□□□□ -1.69
Cux1P53564 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cux1P53564 Gm23325-201ENSMUST00000157422 129 ntBASIC4.51□□□□□ -1.69
Cux1P53564 Gm13147-202ENSMUST00000177526 1173 ntBASIC4.51□□□□□ -1.69
Cux1P53564 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.51□□□□□ -1.69
Cux1P53564 Gm27700-201ENSMUST00000185003 81 ntBASIC4.51□□□□□ -1.69
Cux1P53564 Gm28967-201ENSMUST00000187351 281 ntBASIC4.51□□□□□ -1.69
Cux1P53564 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cux1P53564 Gm44256-201ENSMUST00000203304 335 ntBASIC4.51□□□□□ -1.69
Cux1P53564 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.51□□□□□ -1.69
Cux1P53564 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cux1P53564 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cux1P53564 Gm43526-201ENSMUST00000196666 1565 ntBASIC4.51□□□□□ -1.69
Cux1P53564 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cux1P53564 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Cux1P53564 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cux1P53564 Gm24681-201ENSMUST00000158760 107 ntBASIC4.51□□□□□ -1.69
Cux1P53564 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.51□□□□□ -1.69
Cux1P53564 Gm9587-201ENSMUST00000172449 454 ntBASIC4.51□□□□□ -1.69
Cux1P53564 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC4.51□□□□□ -1.69
Cux1P53564 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cux1P53564 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cux1P53564 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.51□□□□□ -1.69
Cux1P53564 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Cux1P53564 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Cux1P53564 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cux1P53564 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cux1P53564 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.5□□□□□ -1.69
Cux1P53564 CT025538.3-201ENSMUST00000225279 3848 ntBASIC4.5□□□□□ -1.69
Cux1P53564 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.5□□□□□ -1.69
Cux1P53564 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cux1P53564 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.5□□□□□ -1.69
Cux1P53564 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.5□□□□□ -1.69
Cux1P53564 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cux1P53564 Gm22852-201ENSMUST00000177899 101 ntBASIC4.5□□□□□ -1.69
Cux1P53564 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cux1P53564 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cux1P53564 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cux1P53564 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cux1P53564 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.5□□□□□ -1.69
Cux1P53564 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC4.5□□□□□ -1.69
Cux1P53564 Gm37111-201ENSMUST00000193250 634 ntBASIC4.5□□□□□ -1.69
Cux1P53564 Gm37007-201ENSMUST00000194234 319 ntBASIC4.5□□□□□ -1.69
Cux1P53564 Gm38334-201ENSMUST00000195060 313 ntBASIC4.5□□□□□ -1.69
Cux1P53564 Gm18921-201ENSMUST00000221798 366 ntBASIC4.5□□□□□ -1.69
Cux1P53564 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Cux1P53564 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cux1P53564 Gm14988-201ENSMUST00000117224 1548 ntBASIC4.49□□□□□ -1.69
Cux1P53564 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cux1P53564 Gm25500-201ENSMUST00000104426 123 ntBASIC4.49□□□□□ -1.69
Cux1P53564 Gm26247-201ENSMUST00000116702 91 ntBASIC4.49□□□□□ -1.69
Cux1P53564 Gm13024-201ENSMUST00000121756 718 ntBASIC4.49□□□□□ -1.69
Cux1P53564 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cux1P53564 Gm24879-201ENSMUST00000158386 143 ntBASIC4.49□□□□□ -1.69
Cux1P53564 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.49□□□□□ -1.69
Cux1P53564 Mir5118-201ENSMUST00000175551 67 ntBASIC4.49□□□□□ -1.69
Cux1P53564 Gm20612-201ENSMUST00000176318 236 ntBASIC4.49□□□□□ -1.69
Cux1P53564 Gm20656-201ENSMUST00000176925 518 ntBASIC4.49□□□□□ -1.69
Cux1P53564 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cux1P53564 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.49□□□□□ -1.69
Cux1P53564 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.49□□□□□ -1.69
Cux1P53564 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cux1P53564 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.49□□□□□ -1.69
Cux1P53564 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cux1P53564 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.49□□□□□ -1.69
Cux1P53564 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cux1P53564 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cux1P53564 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Cux1P53564 Gm23128-201ENSMUST00000104257 132 ntBASIC4.48□□□□□ -1.69
Cux1P53564 Gm9432-201ENSMUST00000117810 759 ntBASIC4.48□□□□□ -1.69
Cux1P53564 Gm7327-201ENSMUST00000120925 652 ntBASIC4.48□□□□□ -1.69
Cux1P53564 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC4.48□□□□□ -1.69
Cux1P53564 Gm20660-201ENSMUST00000177515 289 ntBASIC4.48□□□□□ -1.69
Cux1P53564 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms