Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.63□□□□□ -1.51
Sox18P43680 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.63□□□□□ -1.51
Sox18P43680 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox18P43680 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Sox18P43680 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox18P43680 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.63□□□□□ -1.51
Sox18P43680 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.62□□□□□ -1.51
Sox18P43680 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox18P43680 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Gm14842-201ENSMUST00000119577 269 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC5.62□□□□□ -1.51
Sox18P43680 Gm24359-201ENSMUST00000158418 221 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Gm3191-201ENSMUST00000167139 346 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Mir195b-201ENSMUST00000184814 97 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Gm44494-201ENSMUST00000196760 129 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Gm44473-201ENSMUST00000204039 152 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Gm44446-201ENSMUST00000204864 255 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Gm44132-201ENSMUST00000205142 151 ntBASIC5.62□□□□□ -1.51
Sox18P43680 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.62□□□□□ -1.51
Sox18P43680 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.62□□□□□ -1.51
Sox18P43680 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox18P43680 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.62□□□□□ -1.51
Sox18P43680 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox18P43680 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox18P43680 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox18P43680 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox18P43680 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox18P43680 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox18P43680 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox18P43680 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox18P43680 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox18P43680 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Sox18P43680 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sox18P43680 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox18P43680 Gm13193-201ENSMUST00000117275 225 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm14656-201ENSMUST00000120342 502 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Sox18P43680 Gm6067-201ENSMUST00000121648 491 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox18P43680 Gm23513-201ENSMUST00000158181 133 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm22384-201ENSMUST00000158187 104 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm25655-201ENSMUST00000158465 290 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm23474-201ENSMUST00000158884 75 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm21827-201ENSMUST00000178247 423 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Spin2g-201ENSMUST00000178425 687 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm5430-201ENSMUST00000182525 915 ntBASIC5.61□□□□□ -1.51
Sox18P43680 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm7329-201ENSMUST00000185915 210 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm38076-201ENSMUST00000193889 450 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm43744-201ENSMUST00000196387 688 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Mir7661-201ENSMUST00000197023 61 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm35648-201ENSMUST00000202304 475 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox18P43680 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm45660-201ENSMUST00000210267 151 ntBASIC5.61□□□□□ -1.51
Sox18P43680 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.61□□□□□ -1.51
Sox18P43680 AC153526.2-201ENSMUST00000218206 2031 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Gm8700-201ENSMUST00000222187 3054 ntBASIC5.61□□□□□ -1.51
Sox18P43680 AC154282.1-201ENSMUST00000223154 265 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox18P43680 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox18P43680 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox18P43680 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox18P43680 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Sox18P43680 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox18P43680 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox18P43680 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox18P43680 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.61□□□□□ -1.51
Sox18P43680 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Sox18P43680 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Sox18P43680 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.6□□□□□ -1.51
Sox18P43680 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.6□□□□□ -1.51
Sox18P43680 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.6□□□□□ -1.51
Sox18P43680 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.6□□□□□ -1.51
Sox18P43680 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox18P43680 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.6□□□□□ -1.51
Sox18P43680 Gm25560-201ENSMUST00000104606 176 ntBASIC5.6□□□□□ -1.51
Sox18P43680 Gm15058-201ENSMUST00000117689 458 ntBASIC5.6□□□□□ -1.51
Sox18P43680 Gm14706-201ENSMUST00000117744 255 ntBASIC5.6□□□□□ -1.51
Sox18P43680 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.6□□□□□ -1.51
Sox18P43680 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.6□□□□□ -1.51
Sox18P43680 Gm25720-201ENSMUST00000157503 105 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms