Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.12□□□□□ -1.91
Cdx2P43241 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.12□□□□□ -1.91
Cdx2P43241 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cdx2P43241 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Cdx2P43241 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdx2P43241 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdx2P43241 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.12□□□□□ -1.91
Cdx2P43241 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.12□□□□□ -1.91
Cdx2P43241 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdx2P43241 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cdx2P43241 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cdx2P43241 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdx2P43241 Gm6797-201ENSMUST00000119440 512 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 Gm12515-201ENSMUST00000120116 361 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.11□□□□□ -1.91
Cdx2P43241 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.11□□□□□ -1.91
Cdx2P43241 Gm25606-201ENSMUST00000158363 95 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx2P43241 Gm18522-201ENSMUST00000173947 650 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdx2P43241 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
Cdx2P43241 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx2P43241 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 Gm18225-201ENSMUST00000216708 742 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.11□□□□□ -1.91
Cdx2P43241 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx2P43241 Gm25004-201ENSMUST00000083811 161 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cdx2P43241 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdx2P43241 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx2P43241 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx2P43241 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.11□□□□□ -1.91
Cdx2P43241 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx2P43241 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx2P43241 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx2P43241 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdx2P43241 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdx2P43241 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx2P43241 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx2P43241 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cdx2P43241 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx2P43241 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdx2P43241 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Cdx2P43241 Gm14981-201ENSMUST00000117325 943 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Gm14791-201ENSMUST00000119061 1166 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.1□□□□□ -1.91
Cdx2P43241 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdx2P43241 Gm22322-201ENSMUST00000157151 111 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Gm25116-201ENSMUST00000157191 122 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Gm24787-201ENSMUST00000157380 123 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Gm44223-201ENSMUST00000204854 114 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdx2P43241 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdx2P43241 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Gm18388-201ENSMUST00000222339 557 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 CT030662.3-201ENSMUST00000228751 476 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx2P43241 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx2P43241 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdx2P43241 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdx2P43241 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Cdx2P43241 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cdx2P43241 Gm37407-201ENSMUST00000194793 1316 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdx2P43241 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Cdx2P43241 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx2P43241 BC051076-202ENSMUST00000199477 2868 ntBASIC3.1□□□□□ -1.91
Cdx2P43241 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cdx2P43241 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Cdx2P43241 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdx2P43241 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdx2P43241 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cdx2P43241 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cdx2P43241 Gm26140-201ENSMUST00000103807 110 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Gm25843-201ENSMUST00000122582 314 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdx2P43241 Gm25967-201ENSMUST00000157168 147 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Gm26214-201ENSMUST00000158581 107 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Gm26215-201ENSMUST00000158584 139 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cdx2P43241 Gm21842-201ENSMUST00000177552 498 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Gm21626-201ENSMUST00000177791 498 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Gm21562-201ENSMUST00000177888 498 ntBASIC3.09□□□□□ -1.91
Cdx2P43241 Gm21539-201ENSMUST00000177925 498 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms