Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm45072-201ENSMUST00000208673 929 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm35262-201ENSMUST00000215133 267 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Sdc1P18828 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Sdc1P18828 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Sdc1P18828 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Sdc1P18828 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Sdc1P18828 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Sdc1P18828 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Sdc1P18828 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Sdc1P18828 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Sdc1P18828 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.92□□□□□ -1.94
Sdc1P18828 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Sdc1P18828 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Sdc1P18828 Gm37777-201ENSMUST00000195546 3366 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm22899-201ENSMUST00000104540 131 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Sdc1P18828 Gm23879-201ENSMUST00000116874 126 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm12125-201ENSMUST00000117261 736 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm15193-201ENSMUST00000120224 865 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Sdc1P18828 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.92□□□□□ -1.94
Sdc1P18828 Zakit-201ENSMUST00000157677 308 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm22521-201ENSMUST00000158272 134 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.92□□□□□ -1.94
Sdc1P18828 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.92□□□□□ -1.94
Sdc1P18828 Gm28503-201ENSMUST00000185966 147 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm37817-201ENSMUST00000195276 434 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm44274-201ENSMUST00000203417 256 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm44294-201ENSMUST00000205090 728 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm45651-201ENSMUST00000210857 335 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.92□□□□□ -1.94
Sdc1P18828 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Sdc1P18828 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Gm18388-201ENSMUST00000222339 557 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 AC100733.1-201ENSMUST00000228494 407 ntBASIC2.92□□□□□ -1.94
Sdc1P18828 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Sdc1P18828 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Sdc1P18828 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
Sdc1P18828 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Sdc1P18828 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Sdc1P18828 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Sdc1P18828 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Sdc1P18828 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Sdc1P18828 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Sdc1P18828 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Sdc1P18828 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Sdc1P18828 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Sdc1P18828 Gm37064-201ENSMUST00000193851 2231 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm24160-201ENSMUST00000104594 126 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm14537-201ENSMUST00000117464 599 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm2288-201ENSMUST00000118560 638 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm12889-201ENSMUST00000118684 241 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm12803-201ENSMUST00000118907 821 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm13676-201ENSMUST00000122185 591 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm25177-201ENSMUST00000122634 117 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Sdc1P18828 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Sdc1P18828 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC2.91□□□□□ -1.94
Sdc1P18828 Gm23716-201ENSMUST00000157348 144 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm22355-201ENSMUST00000175531 96 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Sdc1P18828 Mir7020-201ENSMUST00000183787 70 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm28623-201ENSMUST00000187219 192 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Sdc1P18828 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Sdc1P18828 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Sdc1P18828 Gm44757-201ENSMUST00000206373 157 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm45162-201ENSMUST00000209013 618 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Gm18645-201ENSMUST00000209593 651 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Sdc1P18828 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Sdc1P18828 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Sdc1P18828 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Sdc1P18828 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Sdc1P18828 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Sdc1P18828 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
Sdc1P18828 Gm44434-201ENSMUST00000203918 3745 ntBASIC2.91□□□□□ -1.94
Sdc1P18828 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Sdc1P18828 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Sdc1P18828 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Sdc1P18828 Gm37655-201ENSMUST00000193968 4123 ntBASIC2.9□□□□□ -1.94
Sdc1P18828 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Sdc1P18828 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.9□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms