Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm11804-201ENSMUST00000121663 468 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm13424-201ENSMUST00000122301 354 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm2962-201ENSMUST00000159266 336 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm20480-201ENSMUST00000173953 250 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm22569-201ENSMUST00000175545 124 ntBASIC5.59□□□□□ -1.51
Msx1P13297 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Msx1P13297 Gm5058-201ENSMUST00000187331 463 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm28920-201ENSMUST00000189957 699 ntBASIC5.59□□□□□ -1.51
Msx1P13297 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.59□□□□□ -1.51
Msx1P13297 Gm37681-201ENSMUST00000193880 727 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm38076-201ENSMUST00000193889 450 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm37089-201ENSMUST00000195616 129 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm45236-201ENSMUST00000208632 229 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.59□□□□□ -1.51
Msx1P13297 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msx1P13297 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Msx1P13297 Gm24041-201ENSMUST00000083115 156 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Msx1P13297 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.59□□□□□ -1.51
Msx1P13297 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Msx1P13297 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Msx1P13297 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Msx1P13297 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Msx1P13297 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msx1P13297 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.59□□□□□ -1.51
Msx1P13297 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Msx1P13297 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Msx1P13297 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Msx1P13297 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Msx1P13297 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Msx1P13297 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Msx1P13297 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.59□□□□□ -1.52
Msx1P13297 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Msx1P13297 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Msx1P13297 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Msx1P13297 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.58□□□□□ -1.52
Msx1P13297 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Msx1P13297 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx1P13297 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Msx1P13297 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msx1P13297 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.58□□□□□ -1.52
Msx1P13297 Gm24121-201ENSMUST00000102029 106 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm25560-201ENSMUST00000104606 176 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm8545-201ENSMUST00000120692 801 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm25278-201ENSMUST00000157267 120 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm22596-201ENSMUST00000157601 316 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm26186-201ENSMUST00000157689 125 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm23557-201ENSMUST00000157820 138 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm26372-201ENSMUST00000157831 236 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm3242-201ENSMUST00000171273 485 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm17153-201ENSMUST00000171314 490 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm23921-201ENSMUST00000175258 107 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Msx1P13297 Gm5430-201ENSMUST00000182525 915 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.58□□□□□ -1.52
Msx1P13297 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msx1P13297 Gm37774-201ENSMUST00000194401 245 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm43529-201ENSMUST00000199178 412 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm34091-201ENSMUST00000200875 604 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.58□□□□□ -1.52
Msx1P13297 Gm18320-201ENSMUST00000211304 595 ntBASIC5.58□□□□□ -1.52
Msx1P13297 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.58□□□□□ -1.52
Msx1P13297 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
Msx1P13297 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.58□□□□□ -1.52
Msx1P13297 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.58□□□□□ -1.52
Msx1P13297 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx1P13297 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx1P13297 Mir133b-201ENSMUST00000083546 119 ntBASIC5.58□□□□□ -1.52
Msx1P13297 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx1P13297 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.58□□□□□ -1.52
Msx1P13297 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5.58□□□□□ -1.52
Msx1P13297 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msx1P13297 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx1P13297 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Msx1P13297 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Msx1P13297 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx1P13297 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msx1P13297 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.57□□□□□ -1.52
Msx1P13297 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msx1P13297 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Msx1P13297 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msx1P13297 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Msx1P13297 Gm14421-201ENSMUST00000121755 1958 ntBASIC5.57□□□□□ -1.52
Msx1P13297 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.57□□□□□ -1.52
Msx1P13297 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msx1P13297 Gm24423-201ENSMUST00000101982 106 ntBASIC5.57□□□□□ -1.52
Msx1P13297 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Msx1P13297 Gm15162-201ENSMUST00000119325 283 ntBASIC5.57□□□□□ -1.52
Msx1P13297 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.57□□□□□ -1.52
Msx1P13297 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.57□□□□□ -1.52
Msx1P13297 Gm23211-201ENSMUST00000122717 308 ntBASIC5.57□□□□□ -1.52
Msx1P13297 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.57□□□□□ -1.52
Msx1P13297 Gm22328-201ENSMUST00000158074 112 ntBASIC5.57□□□□□ -1.52
Msx1P13297 Gm25603-201ENSMUST00000158361 105 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms