Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm27527-201ENSMUST00000183903 99 ntBASIC2.42□□□□□ -2.02
TcraP01849 Gm27477-201ENSMUST00000184649 143 ntBASIC2.42□□□□□ -2.02
TcraP01849 Gm19280-201ENSMUST00000190191 205 ntBASIC2.42□□□□□ -2.02
TcraP01849 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.42□□□□□ -2.02
TcraP01849 Gm43489-201ENSMUST00000196810 993 ntBASIC2.42□□□□□ -2.02
TcraP01849 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TcraP01849 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TcraP01849 Gm45379-201ENSMUST00000211772 549 ntBASIC2.42□□□□□ -2.02
TcraP01849 Gm45796-201ENSMUST00000212483 114 ntBASIC2.42□□□□□ -2.02
TcraP01849 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TcraP01849 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.42□□□□□ -2.02
TcraP01849 AC140344.1-201ENSMUST00000223384 387 ntBASIC2.42□□□□□ -2.02
TcraP01849 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.42□□□□□ -2.02
TcraP01849 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.42□□□□□ -2.02
TcraP01849 AC130673.2-201ENSMUST00000228091 797 ntBASIC2.42□□□□□ -2.02
TcraP01849 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TcraP01849 Snord15a-201ENSMUST00000083888 148 ntBASIC2.42□□□□□ -2.02
TcraP01849 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TcraP01849 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.42□□□□□ -2.02
TcraP01849 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.42□□□□□ -2.02
TcraP01849 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TcraP01849 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.42□□□□□ -2.02
TcraP01849 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TcraP01849 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TcraP01849 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TcraP01849 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TcraP01849 Igkv11-106-201ENSMUST00000103331 346 ntBASIC2.41□□□□□ -2.02
TcraP01849 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TcraP01849 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TcraP01849 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.41□□□□□ -2.02
TcraP01849 Gm7123-201ENSMUST00000117647 213 ntBASIC2.41□□□□□ -2.02
TcraP01849 Gm12025-201ENSMUST00000117768 144 ntBASIC2.41□□□□□ -2.02
TcraP01849 Gm15026-201ENSMUST00000119219 458 ntBASIC2.41□□□□□ -2.02
TcraP01849 Gm11704-201ENSMUST00000120031 214 ntBASIC2.41□□□□□ -2.02
TcraP01849 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TcraP01849 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.41□□□□□ -2.02
TcraP01849 Gm22853-201ENSMUST00000174974 131 ntBASIC2.41□□□□□ -2.02
TcraP01849 Gm27903-201ENSMUST00000175482 126 ntBASIC2.41□□□□□ -2.02
TcraP01849 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TcraP01849 Mir713-201ENSMUST00000178651 108 ntBASIC2.41□□□□□ -2.02
TcraP01849 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.41□□□□□ -2.02
TcraP01849 Gm29658-201ENSMUST00000185404 230 ntBASIC2.41□□□□□ -2.02
TcraP01849 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TcraP01849 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.41□□□□□ -2.02
TcraP01849 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TcraP01849 Trbv28-201ENSMUST00000192804 264 ntBASIC2.41□□□□□ -2.02
TcraP01849 Gm37617-201ENSMUST00000194309 159 ntBASIC2.41□□□□□ -2.02
TcraP01849 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.41□□□□□ -2.02
TcraP01849 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.41□□□□□ -2.02
TcraP01849 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TcraP01849 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC2.41□□□□□ -2.02
TcraP01849 Gm44690-201ENSMUST00000207984 382 ntBASIC2.41□□□□□ -2.02
TcraP01849 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TcraP01849 Gm40598-201ENSMUST00000222953 547 ntBASIC2.41□□□□□ -2.02
TcraP01849 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TcraP01849 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TcraP01849 Gm26226-201ENSMUST00000082509 116 ntBASIC2.41□□□□□ -2.02
TcraP01849 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TcraP01849 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TcraP01849 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TcraP01849 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
TcraP01849 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TcraP01849 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TcraP01849 Gm12401-201ENSMUST00000118435 228 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm5762-201ENSMUST00000119204 258 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm14939-201ENSMUST00000120347 680 ntBASIC2.4□□□□□ -2.03
TcraP01849 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm22226-201ENSMUST00000157355 109 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC2.4□□□□□ -2.03
TcraP01849 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TcraP01849 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm20773-201ENSMUST00000178940 681 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm7909-201ENSMUST00000182688 614 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm28002-201ENSMUST00000184832 100 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm29408-201ENSMUST00000187536 216 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC2.4□□□□□ -2.03
TcraP01849 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
TcraP01849 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.4□□□□□ -2.03
TcraP01849 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
TcraP01849 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC2.4□□□□□ -2.03
TcraP01849 Gm44223-201ENSMUST00000204854 114 ntBASIC2.4□□□□□ -2.03
TcraP01849 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TcraP01849 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TcraP01849 AC159246.1-201ENSMUST00000214478 249 ntBASIC2.4□□□□□ -2.03
TcraP01849 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.4□□□□□ -2.03
TcraP01849 AC132315.1-201ENSMUST00000221771 390 ntBASIC2.4□□□□□ -2.03
TcraP01849 AC124562.1-201ENSMUST00000224673 337 ntBASIC2.4□□□□□ -2.03
TcraP01849 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.4□□□□□ -2.03
TcraP01849 AC124581.4-201ENSMUST00000225874 463 ntBASIC2.4□□□□□ -2.03
TcraP01849 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TcraP01849 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC2.4□□□□□ -2.03
TcraP01849 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TcraP01849 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TcraP01849 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TcraP01849 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TcraP01849 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TcraP01849 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm13058-201ENSMUST00000117097 1435 ntBASIC2.4□□□□□ -2.03
TcraP01849 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms