Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm29011-201ENSMUST00000191059 712 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 AC158641.1-201ENSMUST00000218933 229 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 Gm5176-202ENSMUST00000220267 583 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 Snord14e-201ENSMUST00000082857 90 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 Gm22864-201ENSMUST00000083950 130 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col5a1O88207 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col5a1O88207 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm5123-201ENSMUST00000121905 837 ntBASIC2.88□□□□□ -1.95
Col5a1O88207 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm5755-201ENSMUST00000152394 837 ntBASIC2.88□□□□□ -1.95
Col5a1O88207 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.88□□□□□ -1.95
Col5a1O88207 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.88□□□□□ -1.95
Col5a1O88207 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.88□□□□□ -1.95
Col5a1O88207 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.88□□□□□ -1.95
Col5a1O88207 AC154838.2-201ENSMUST00000226602 747 ntBASIC2.88□□□□□ -1.95
Col5a1O88207 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col5a1O88207 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm37672-201ENSMUST00000192682 4014 ntBASIC2.88□□□□□ -1.95
Col5a1O88207 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col5a1O88207 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col5a1O88207 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Col5a1O88207 Gm42927-201ENSMUST00000200624 3841 ntBASIC2.88□□□□□ -1.95
Col5a1O88207 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC2.88□□□□□ -1.95
Col5a1O88207 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm45264-201ENSMUST00000210090 3995 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col5a1O88207 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm11877-201ENSMUST00000118921 852 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm11881-201ENSMUST00000119408 572 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm15267-201ENSMUST00000120888 464 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm22187-201ENSMUST00000157819 129 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm6245-201ENSMUST00000164699 768 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm26061-201ENSMUST00000175584 108 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21842-201ENSMUST00000177552 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21626-201ENSMUST00000177791 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21562-201ENSMUST00000177888 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21539-201ENSMUST00000177925 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm17522-201ENSMUST00000178144 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21599-201ENSMUST00000178249 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21914-201ENSMUST00000178452 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21723-201ENSMUST00000178692 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21916-201ENSMUST00000178771 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21801-201ENSMUST00000178865 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21633-201ENSMUST00000178941 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm17412-201ENSMUST00000179261 468 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21821-201ENSMUST00000179646 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21588-201ENSMUST00000180074 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21780-201ENSMUST00000180128 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21572-201ENSMUST00000180134 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm21529-201ENSMUST00000180175 498 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
Col5a1O88207 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm29370-202ENSMUST00000187476 499 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm44308-201ENSMUST00000197080 99 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.87□□□□□ -1.95
Col5a1O88207 AC118006.1-201ENSMUST00000224211 501 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col5a1O88207 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Olfr192-201ENSMUST00000080251 925 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col5a1O88207 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col5a1O88207 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col5a1O88207 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col5a1O88207 Gm42909-201ENSMUST00000196982 3619 ntBASIC2.87□□□□□ -1.95
Col5a1O88207 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col5a1O88207 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col5a1O88207 Gm14890-201ENSMUST00000117660 676 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.86□□□□□ -1.95
Col5a1O88207 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.86□□□□□ -1.95
Col5a1O88207 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.86□□□□□ -1.95
Col5a1O88207 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Col5a1O88207 Gm24919-201ENSMUST00000083020 106 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms