Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm23875-201ENSMUST00000083711 318 ntBASIC4.02□□□□□ -1.77
Clk3O35492 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Clk3O35492 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.02□□□□□ -1.77
Clk3O35492 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Clk3O35492 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Clk3O35492 AC134917.1-201ENSMUST00000220517 1449 ntBASIC4.02□□□□□ -1.77
Clk3O35492 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Clk3O35492 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Clk3O35492 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.02□□□□□ -1.77
Clk3O35492 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Clk3O35492 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Clk3O35492 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Clk3O35492 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Clk3O35492 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Clk3O35492 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Clk3O35492 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Clk3O35492 Mir592-201ENSMUST00000102113 96 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm22472-201ENSMUST00000104115 134 ntBASIC4.01□□□□□ -1.77
Clk3O35492 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm12568-201ENSMUST00000117362 624 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm13550-201ENSMUST00000118185 525 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm26393-201ENSMUST00000157625 129 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm16589-201ENSMUST00000159522 918 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Clk3O35492 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm23638-201ENSMUST00000175073 126 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm23158-201ENSMUST00000175076 126 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm22907-201ENSMUST00000175198 126 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm22625-201ENSMUST00000175382 126 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm22875-201ENSMUST00000175449 126 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm25197-201ENSMUST00000175516 126 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm27857-201ENSMUST00000176930 126 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm26268-201ENSMUST00000177685 126 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm23681-201ENSMUST00000178821 126 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm27940-201ENSMUST00000184449 98 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm43730-201ENSMUST00000199863 372 ntBASIC4.01□□□□□ -1.77
Clk3O35492 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm45458-201ENSMUST00000209900 522 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC4.01□□□□□ -1.77
Clk3O35492 AC145736.1-201ENSMUST00000214661 479 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Clk3O35492 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.01□□□□□ -1.77
Clk3O35492 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Clk3O35492 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.01□□□□□ -1.77
Clk3O35492 AC109172.1-201ENSMUST00000227503 187 ntBASIC4.01□□□□□ -1.77
Clk3O35492 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Clk3O35492 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm24622-201ENSMUST00000082619 162 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Gm24490-201ENSMUST00000083803 98 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Clk3O35492 Synpr-207ENSMUST00000223583 3362 ntBASIC4.01□□□□□ -1.77
Clk3O35492 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Clk3O35492 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Clk3O35492 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Clk3O35492 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Clk3O35492 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4□□□□□ -1.77
Clk3O35492 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4□□□□□ -1.77
Clk3O35492 Gm36927-201ENSMUST00000192504 1841 ntBASIC4□□□□□ -1.77
Clk3O35492 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Clk3O35492 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4□□□□□ -1.77
Clk3O35492 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4□□□□□ -1.77
Clk3O35492 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Clk3O35492 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Clk3O35492 Gm13664-201ENSMUST00000117304 345 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm11398-201ENSMUST00000120330 320 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm15926-201ENSMUST00000120492 550 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm13720-201ENSMUST00000120741 196 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm6373-201ENSMUST00000121026 360 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm12317-201ENSMUST00000122307 319 ntBASIC4□□□□□ -1.77
Clk3O35492 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Clk3O35492 Gm22390-201ENSMUST00000157588 325 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm23781-201ENSMUST00000157940 308 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm9613-201ENSMUST00000171662 196 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm27896-201ENSMUST00000175162 317 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm27690-201ENSMUST00000184596 126 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm27414-201ENSMUST00000185033 381 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm29228-201ENSMUST00000185489 418 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm19066-201ENSMUST00000193232 1078 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm37209-201ENSMUST00000194109 1276 ntBASIC4□□□□□ -1.77
Clk3O35492 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Clk3O35492 Gm43710-201ENSMUST00000199583 452 ntBASIC4□□□□□ -1.77
Clk3O35492 Gm43198-201ENSMUST00000200927 326 ntBASIC4□□□□□ -1.77
Clk3O35492 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms