Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm23518-201ENSMUST00000082835 153 ntBASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm24125-201ENSMUST00000104105 137 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm24281-201ENSMUST00000104234 136 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm12106-201ENSMUST00000116006 1200 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm13268-201ENSMUST00000117485 433 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm15313-201ENSMUST00000119179 282 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm14282-201ENSMUST00000119484 240 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm14586-201ENSMUST00000119571 408 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm24380-201ENSMUST00000122696 324 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm24061-201ENSMUST00000157489 120 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm24014-201ENSMUST00000157728 157 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm25386-201ENSMUST00000157814 288 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm22186-201ENSMUST00000157822 122 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm27342-201ENSMUST00000183530 109 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Mir6943-201ENSMUST00000185186 66 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm28924-201ENSMUST00000190012 241 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm38231-201ENSMUST00000192030 347 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm38061-201ENSMUST00000192490 365 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm37576-201ENSMUST00000194228 372 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.55□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm24120-201ENSMUST00000103978 129 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm23273-201ENSMUST00000104058 135 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm26273-201ENSMUST00000104180 131 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm11896-201ENSMUST00000121105 820 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm14463-201ENSMUST00000121117 498 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm9003-201ENSMUST00000121810 482 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm11506-201ENSMUST00000122414 470 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm18667-201ENSMUST00000186523 484 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm37416-201ENSMUST00000193596 318 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm43043-201ENSMUST00000196579 412 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm8820-201ENSMUST00000204077 571 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm19244-201ENSMUST00000204340 253 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm45146-201ENSMUST00000207108 221 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Mir370-201ENSMUST00000083499 79 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trbv12-1A0A0B4J1H0 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms