Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Mir875-201ENSMUST00000104698 78 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm13550-201ENSMUST00000118185 525 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm15660-201ENSMUST00000118997 478 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm15112-201ENSMUST00000120152 860 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm15212-201ENSMUST00000122403 466 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm26278-201ENSMUST00000157098 132 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Scarna10-201ENSMUST00000158992 325 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm3170-201ENSMUST00000168753 850 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Mirt2-201ENSMUST00000175179 285 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm22932-201ENSMUST00000175510 72 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm3348-201ENSMUST00000177813 850 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Mir7082-201ENSMUST00000183526 92 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm43407-201ENSMUST00000199816 317 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm6520-201ENSMUST00000200636 410 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm44817-201ENSMUST00000205416 453 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm44768-201ENSMUST00000205719 393 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm17988-201ENSMUST00000208796 535 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Olfr151-202ENSMUST00000221099 929 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Snord59a-201ENSMUST00000082844 74 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm22997-201ENSMUST00000082845 107 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Snord98-201ENSMUST00000116819 65 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm12281-201ENSMUST00000119536 298 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm14175-201ENSMUST00000119835 241 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm6062-201ENSMUST00000120462 631 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm22867-201ENSMUST00000157499 109 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm23224-201ENSMUST00000158122 271 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm23262-201ENSMUST00000158323 168 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm23115-201ENSMUST00000158480 108 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm22435-201ENSMUST00000158552 128 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm27521-201ENSMUST00000184022 64 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm29031-201ENSMUST00000185316 614 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm29000-201ENSMUST00000185444 614 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm28204-201ENSMUST00000185934 614 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm28290-201ENSMUST00000186505 614 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm28161-201ENSMUST00000186669 614 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm28749-209ENSMUST00000189599 614 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm29475-201ENSMUST00000190767 312 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm33163-201ENSMUST00000194504 614 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm42570-201ENSMUST00000195937 292 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm6059-201ENSMUST00000196903 340 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm43033-201ENSMUST00000199682 425 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm19177-201ENSMUST00000204520 613 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim39Q9ESN2 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.18□□□□□ -1.58
Trim39Q9ESN2 Gm7540-201ENSMUST00000219764 926 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms