Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm28574-201ENSMUST00000185757 699 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm28781-201ENSMUST00000185760 696 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm28339-201ENSMUST00000185845 696 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm29062-201ENSMUST00000186032 694 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm29574-201ENSMUST00000186226 696 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm28828-201ENSMUST00000186601 696 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm28057-201ENSMUST00000186603 615 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm28255-201ENSMUST00000187101 694 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm29307-201ENSMUST00000187367 696 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm28397-201ENSMUST00000187970 699 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm28896-201ENSMUST00000188609 696 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm29545-201ENSMUST00000188878 694 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm29339-201ENSMUST00000189613 696 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm28159-201ENSMUST00000190296 696 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm29366-201ENSMUST00000190481 699 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm29407-201ENSMUST00000191468 696 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm37343-201ENSMUST00000192542 111 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm37433-201ENSMUST00000192695 678 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm37441-201ENSMUST00000194430 678 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm38107-201ENSMUST00000194873 696 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm45245-201ENSMUST00000210082 376 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm8423-201ENSMUST00000211387 607 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm18704-201ENSMUST00000219736 446 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm7119-201ENSMUST00000221345 695 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 CT009764.1-201ENSMUST00000222260 483 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 AC192088.2-201ENSMUST00000227590 411 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm43216-201ENSMUST00000196295 1333 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm23256-201ENSMUST00000102235 110 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm26140-201ENSMUST00000103807 110 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm12788-201ENSMUST00000119090 308 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm12495-201ENSMUST00000119750 447 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm12900-201ENSMUST00000120919 573 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm13511-201ENSMUST00000121167 363 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm15488-201ENSMUST00000121682 670 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm16359-201ENSMUST00000124511 289 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm22320-201ENSMUST00000157149 312 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm25667-201ENSMUST00000157701 275 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm9587-201ENSMUST00000172449 454 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm22908-201ENSMUST00000177620 110 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm42516-201ENSMUST00000198691 767 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm2314-201ENSMUST00000200391 586 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm18672-201ENSMUST00000208035 270 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.14□□□□□ -1.75
Smc1aQ9CU62 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm24273-201ENSMUST00000102332 164 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm11566-201ENSMUST00000118550 203 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm11746-201ENSMUST00000119843 821 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm14768-201ENSMUST00000122126 678 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm25105-201ENSMUST00000122477 130 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm24730-201ENSMUST00000158228 117 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm24875-201ENSMUST00000158888 104 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm2862-201ENSMUST00000161524 328 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm25944-201ENSMUST00000178758 94 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm5527-201ENSMUST00000179821 642 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm26746-201ENSMUST00000181722 487 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms