Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm22444-201ENSMUST00000093693 108 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm8734-201ENSMUST00000211669 1312 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm25765-201ENSMUST00000104100 132 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm15613-201ENSMUST00000118396 326 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm12954-201ENSMUST00000118610 611 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm9119-201ENSMUST00000118866 495 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm13359-201ENSMUST00000119000 695 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm11797-201ENSMUST00000121336 754 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm14800-201ENSMUST00000122084 1272 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm24592-201ENSMUST00000122505 106 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm16147-201ENSMUST00000162143 373 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm4761-201ENSMUST00000178086 582 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm4479-201ENSMUST00000178807 171 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm26746-201ENSMUST00000181722 487 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Mir7676-1-201ENSMUST00000183491 62 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Mir7676-2-201ENSMUST00000183523 62 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Mir6410-201ENSMUST00000184204 104 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm18433-202ENSMUST00000195682 196 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm45105-201ENSMUST00000207824 397 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm7540-201ENSMUST00000219764 926 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 AC154198.1-201ENSMUST00000222839 424 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTRAFQ9CQE8 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm24281-201ENSMUST00000104234 136 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm25726-201ENSMUST00000104529 129 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm15382-201ENSMUST00000118011 537 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm12543-201ENSMUST00000120410 543 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm13007-201ENSMUST00000121866 365 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm24537-201ENSMUST00000157950 102 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm20399-201ENSMUST00000174652 132 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm25198-201ENSMUST00000178574 110 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm27538-201ENSMUST00000185065 294 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm29513-201ENSMUST00000185741 202 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm37670-201ENSMUST00000193622 229 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm37088-201ENSMUST00000193887 406 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm44354-201ENSMUST00000196017 143 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Trdv3-201ENSMUST00000198551 309 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm18327-201ENSMUST00000202426 830 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm19177-201ENSMUST00000204520 613 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm44266-201ENSMUST00000205235 500 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 AL772397.1-201ENSMUST00000216707 606 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm18704-201ENSMUST00000219736 446 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm7204-201ENSMUST00000062591 600 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Gm23975-201ENSMUST00000082685 106 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Mir325-201ENSMUST00000083491 98 ntBASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RTRAFQ9CQE8 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms