Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm23975-201ENSMUST00000082685 106 ntBASIC3.41□□□□□ -1.86
Ska1Q9CPV1 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ska1Q9CPV1 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ska1Q9CPV1 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.41□□□□□ -1.86
Ska1Q9CPV1 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Ska1Q9CPV1 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.41□□□□□ -1.86
Ska1Q9CPV1 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.4□□□□□ -1.86
Ska1Q9CPV1 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ska1Q9CPV1 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.4□□□□□ -1.86
Ska1Q9CPV1 Mir193b-201ENSMUST00000103784 79 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm14537-201ENSMUST00000117464 599 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm15074-201ENSMUST00000117603 936 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm12691-201ENSMUST00000120186 456 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm14008-201ENSMUST00000120483 274 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm13080-201ENSMUST00000120556 420 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm12900-201ENSMUST00000120919 573 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm12578-201ENSMUST00000121244 417 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm23228-201ENSMUST00000157296 270 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm22816-201ENSMUST00000157450 117 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm22726-201ENSMUST00000158089 179 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm22889-201ENSMUST00000158639 58 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm23365-201ENSMUST00000175019 125 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm25960-201ENSMUST00000175110 125 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm44453-201ENSMUST00000175161 126 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm25195-201ENSMUST00000177656 126 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm7449-201ENSMUST00000194393 663 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm3933-201ENSMUST00000195391 439 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm44857-201ENSMUST00000208331 196 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Gm23846-201ENSMUST00000083835 107 ntBASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ska1Q9CPV1 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm24671-201ENSMUST00000104159 158 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm22493-201ENSMUST00000104494 132 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm11393-201ENSMUST00000118019 288 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm14753-201ENSMUST00000118503 246 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm16363-201ENSMUST00000132460 877 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm26148-201ENSMUST00000157430 68 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Mir7074-201ENSMUST00000183884 63 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm37428-201ENSMUST00000193886 137 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm44099-201ENSMUST00000203299 112 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ska1Q9CPV1 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm24951-201ENSMUST00000102182 109 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Mir294-201ENSMUST00000104710 84 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm13567-201ENSMUST00000118026 247 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm14607-201ENSMUST00000119119 491 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm13574-201ENSMUST00000120482 394 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm15263-201ENSMUST00000121556 642 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm14578-201ENSMUST00000122166 391 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm22613-201ENSMUST00000122679 292 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.38□□□□□ -1.87
Ska1Q9CPV1 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Atp2b4-208ENSMUST00000167348 243 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm24520-201ENSMUST00000179510 110 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm3454-201ENSMUST00000185571 412 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm8296-201ENSMUST00000185597 524 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm37698-201ENSMUST00000192605 463 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm42516-201ENSMUST00000198691 767 ntBASIC3.38□□□□□ -1.87
Ska1Q9CPV1 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ska1Q9CPV1 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms