Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm24541-201ENSMUST00000103871 96 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm12230-201ENSMUST00000118301 454 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm14103-201ENSMUST00000119075 366 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm15480-201ENSMUST00000120442 519 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm11385-201ENSMUST00000121513 570 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm22840-201ENSMUST00000158444 136 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm26141-201ENSMUST00000175299 126 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm28534-201ENSMUST00000187744 676 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm43441-201ENSMUST00000201458 205 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm4501-201ENSMUST00000207330 551 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm4528-201ENSMUST00000207905 551 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 AC152415.1-201ENSMUST00000213320 440 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 AL662807.1-201ENSMUST00000224183 126 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Nup35Q8R4R6 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC2.59□□□□□ -2
Nup35Q8R4R6 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Nup35Q8R4R6 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.59□□□□□ -2
Nup35Q8R4R6 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.59□□□□□ -2
Nup35Q8R4R6 Gm6545-201ENSMUST00000217186 1786 ntBASIC2.59□□□□□ -2
Nup35Q8R4R6 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Nup35Q8R4R6 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Nup35Q8R4R6 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Defa-ps9-201ENSMUST00000118264 276 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm15854-201ENSMUST00000118879 808 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm12691-201ENSMUST00000120186 456 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm14253-201ENSMUST00000122112 639 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm23183-201ENSMUST00000122595 323 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm22961-201ENSMUST00000157964 106 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm27796-201ENSMUST00000183863 261 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm21139-201ENSMUST00000186594 877 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm29525-201ENSMUST00000189844 699 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm44690-201ENSMUST00000207984 382 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm20074-201ENSMUST00000208144 484 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm6842-201ENSMUST00000211361 390 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 AL772397.1-201ENSMUST00000216707 606 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.58□□□□□ -2
Nup35Q8R4R6 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC2.58□□□□□ -2
Nup35Q8R4R6 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 AC154419.1-201ENSMUST00000227627 272 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Nup35Q8R4R6 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Nup35Q8R4R6 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nup35Q8R4R6 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.58□□□□□ -2
Nup35Q8R4R6 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.58□□□□□ -2
Nup35Q8R4R6 AC131068.3-201ENSMUST00000228438 1456 ntBASIC2.58□□□□□ -2
Nup35Q8R4R6 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nup35Q8R4R6 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nup35Q8R4R6 Gm23273-201ENSMUST00000104058 135 ntBASIC2.57□□□□□ -2
Nup35Q8R4R6 Mir291a-201ENSMUST00000104815 82 ntBASIC2.57□□□□□ -2
Nup35Q8R4R6 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Nup35Q8R4R6 Gm22986-201ENSMUST00000122753 130 ntBASIC2.57□□□□□ -2
Nup35Q8R4R6 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Nup35Q8R4R6 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Nup35Q8R4R6 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nup35Q8R4R6 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nup35Q8R4R6 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.57□□□□□ -2
Nup35Q8R4R6 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Nup35Q8R4R6 Gm37428-201ENSMUST00000193886 137 ntBASIC2.57□□□□□ -2
Nup35Q8R4R6 Gm17781-201ENSMUST00000195232 649 ntBASIC2.57□□□□□ -2
Nup35Q8R4R6 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.57□□□□□ -2
Nup35Q8R4R6 Mir129b-201ENSMUST00000197461 65 ntBASIC2.57□□□□□ -2
Nup35Q8R4R6 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.57□□□□□ -2
Nup35Q8R4R6 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.57□□□□□ -2
Nup35Q8R4R6 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Nup35Q8R4R6 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC2.57□□□□□ -2
Nup35Q8R4R6 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms