Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm29668-201ENSMUST00000187802 315 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm28337-201ENSMUST00000190425 666 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm37054-201ENSMUST00000193481 543 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm34015-201ENSMUST00000194908 451 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm45727-201ENSMUST00000212886 572 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm17779-201ENSMUST00000213395 394 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm29809-201ENSMUST00000218423 493 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm14753-201ENSMUST00000118503 246 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm14517-201ENSMUST00000119040 337 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm16017-201ENSMUST00000119834 208 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm22514-201ENSMUST00000122547 308 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm16274-201ENSMUST00000139251 592 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm23591-201ENSMUST00000157663 286 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm20673-201ENSMUST00000177167 430 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm6214-201ENSMUST00000178845 541 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm21758-201ENSMUST00000179336 819 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm27805-201ENSMUST00000184513 79 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm6075-201ENSMUST00000186816 486 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm29647-201ENSMUST00000188795 666 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm20832-201ENSMUST00000189076 665 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm28504-201ENSMUST00000190977 666 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm31511-201ENSMUST00000193134 657 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm20162-201ENSMUST00000193629 871 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm35843-201ENSMUST00000193716 666 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm38053-201ENSMUST00000193938 160 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm30638-201ENSMUST00000195570 656 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm36728-201ENSMUST00000195782 665 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm42805-201ENSMUST00000196158 276 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm44961-201ENSMUST00000207450 196 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm44871-201ENSMUST00000207821 497 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm45857-201ENSMUST00000212207 356 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 AC153924.1-201ENSMUST00000220117 312 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ushbp1Q8R370 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm25507-201ENSMUST00000116981 144 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm7429-201ENSMUST00000118664 348 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm14731-201ENSMUST00000119216 376 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm15603-201ENSMUST00000119252 492 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm14785-201ENSMUST00000120185 539 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm6587-201ENSMUST00000120219 613 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm14656-201ENSMUST00000120342 502 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm11692-201ENSMUST00000122121 902 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm22199-201ENSMUST00000122660 126 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm26373-201ENSMUST00000157833 103 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm24961-201ENSMUST00000157918 184 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm22836-201ENSMUST00000158441 61 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm25447-201ENSMUST00000158997 128 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm25874-201ENSMUST00000178030 79 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm29031-201ENSMUST00000185316 614 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm29000-201ENSMUST00000185444 614 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms