Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm45367-201ENSMUST00000210171 347 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm45409-201ENSMUST00000211486 252 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm23099-201ENSMUST00000083454 139 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm23256-201ENSMUST00000102235 110 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm26140-201ENSMUST00000103807 110 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm12387-201ENSMUST00000118573 955 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm14926-201ENSMUST00000120650 508 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm22143-201ENSMUST00000157401 203 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm16558-201ENSMUST00000163015 532 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm3084-201ENSMUST00000169967 598 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm22908-201ENSMUST00000177620 110 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Mir7037-201ENSMUST00000184414 65 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm37219-201ENSMUST00000192036 926 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm38234-201ENSMUST00000195204 421 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm42453-201ENSMUST00000200477 409 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm44058-201ENSMUST00000204335 467 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 AC156795.1-201ENSMUST00000214655 414 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm18903-201ENSMUST00000215343 480 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm5176-202ENSMUST00000220267 583 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 AC154452.1-201ENSMUST00000225819 241 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 AF357341-201ENSMUST00000083088 75 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Mir370-201ENSMUST00000083499 79 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Mir383-201ENSMUST00000083523 70 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Mir463-201ENSMUST00000093570 75 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm13733-201ENSMUST00000117290 535 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm11874-201ENSMUST00000117437 130 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm11407-201ENSMUST00000120362 1058 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm12466-201ENSMUST00000121199 620 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm13009-201ENSMUST00000121307 267 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm26476-201ENSMUST00000122618 313 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm6058-201ENSMUST00000154261 399 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm23906-201ENSMUST00000157573 128 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm23513-201ENSMUST00000158181 133 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm2855-201ENSMUST00000166765 456 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm22355-201ENSMUST00000175531 96 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm23145-201ENSMUST00000178912 79 ntBASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc28bQ8CEG5 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms