Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Gm10025-201ENSMUST00000079568 372 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Gm42455-201ENSMUST00000199761 2736 ntBASIC2.65□□□□□ -1.98
Col6a6Q8C6K9 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.98
Col6a6Q8C6K9 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Gm42990-201ENSMUST00000199231 312 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Gm45452-201ENSMUST00000210905 177 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Gm18388-201ENSMUST00000222339 557 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 AC126253.2-201ENSMUST00000226518 205 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Gm12010-201ENSMUST00000122400 2017 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Gm37900-201ENSMUST00000195510 3805 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Gm26015-201ENSMUST00000104402 125 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Mir3076-201ENSMUST00000175415 60 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Gm21960-201ENSMUST00000181924 452 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Mir7068-201ENSMUST00000183439 74 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Gm44157-201ENSMUST00000204720 410 ntBASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col6a6Q8C6K9 AC135119.1-201ENSMUST00000227935 3717 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm38069-201ENSMUST00000195360 2144 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm25863-201ENSMUST00000158249 329 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm28781-201ENSMUST00000185760 696 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm29574-201ENSMUST00000186226 696 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm29307-201ENSMUST00000187367 696 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm28896-201ENSMUST00000188609 696 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm29339-201ENSMUST00000189613 696 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm28159-201ENSMUST00000190296 696 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm29407-201ENSMUST00000191468 696 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm38107-201ENSMUST00000194873 696 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm43746-201ENSMUST00000200028 317 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Gm7753-201ENSMUST00000221007 867 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC2.64□□□□□ -1.99
Col6a6Q8C6K9 AC091683.1-201ENSMUST00000222307 2446 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm14821-201ENSMUST00000121975 435 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm29602-201ENSMUST00000186887 442 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm43601-201ENSMUST00000196294 945 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm44376-201ENSMUST00000197570 128 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm43651-201ENSMUST00000199796 439 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm44016-201ENSMUST00000203463 164 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 AC132833.3-201ENSMUST00000227472 866 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 AC160130.1-201ENSMUST00000220734 2735 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm44682-201ENSMUST00000208501 2614 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm9314-201ENSMUST00000199881 1528 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm23551-201ENSMUST00000116852 121 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm11456-201ENSMUST00000121070 256 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm25280-201ENSMUST00000157269 101 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm29038-201ENSMUST00000191543 678 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm45200-201ENSMUST00000207434 919 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Gm4052-201ENSMUST00000220890 451 ntBASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col6a6Q8C6K9 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col6a6Q8C6K9 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Col6a6Q8C6K9 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.62□□□□□ -1.99
Col6a6Q8C6K9 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col6a6Q8C6K9 Gm11905-201ENSMUST00000117653 678 ntBASIC2.62□□□□□ -1.99
Col6a6Q8C6K9 Gm12387-201ENSMUST00000118573 955 ntBASIC2.62□□□□□ -1.99
Col6a6Q8C6K9 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Col6a6Q8C6K9 Gm4761-201ENSMUST00000178086 582 ntBASIC2.62□□□□□ -1.99
Col6a6Q8C6K9 Gm25360-201ENSMUST00000178786 191 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms