Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm46389-201ENSMUST00000223199 392 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 AC173482.4-201ENSMUST00000225096 348 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm15267-201ENSMUST00000120888 464 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm23211-201ENSMUST00000122717 308 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm2092-201ENSMUST00000178887 639 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm2759-201ENSMUST00000179938 639 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm28847-201ENSMUST00000186778 700 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm37070-201ENSMUST00000193272 460 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm38011-201ENSMUST00000193312 279 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm37030-201ENSMUST00000194254 295 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 AC154576.2-202ENSMUST00000223916 688 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm22997-201ENSMUST00000082845 107 ntBASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sh3rf1Q69ZI1 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Gm15428-201ENSMUST00000121352 333 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Gm12685-201ENSMUST00000121702 214 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Gm23213-201ENSMUST00000122715 313 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 n-R5s87-201ENSMUST00000122752 116 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Gm6956-201ENSMUST00000134724 546 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Gm24909-201ENSMUST00000157290 280 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Gm22804-201ENSMUST00000158052 101 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Gm24175-201ENSMUST00000158931 129 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Mir5103-201ENSMUST00000175111 79 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Gm26180-201ENSMUST00000179942 107 ntBASIC5.26□□□□□ -1.57
Sh3rf1Q69ZI1 Gm27543-201ENSMUST00000183562 177 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms