Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Trim28Q62318 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Gm11645-201ENSMUST00000121589 649 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Gm16274-201ENSMUST00000139251 592 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim28Q62318 Gm23098-201ENSMUST00000157552 299 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Gm20648-201ENSMUST00000175815 328 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim28Q62318 Gm43228-201ENSMUST00000200735 264 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim28Q62318 Gm4501-201ENSMUST00000207330 551 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Gm4558-201ENSMUST00000207886 521 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim28Q62318 Gm7948-201ENSMUST00000212607 844 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim28Q62318 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim28Q62318 Gm23927-201ENSMUST00000082466 215 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Mir370-201ENSMUST00000083499 79 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Mir215-201ENSMUST00000083628 112 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim28Q62318 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim28Q62318 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 AC167360.1-201ENSMUST00000222596 2494 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim28Q62318 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim28Q62318 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim28Q62318 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim28Q62318 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim28Q62318 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim28Q62318 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim28Q62318 Gm4736-201ENSMUST00000100870 380 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm24608-201ENSMUST00000104381 136 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm14670-201ENSMUST00000117327 337 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm12492-201ENSMUST00000117665 564 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm11718-201ENSMUST00000119942 537 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm14600-201ENSMUST00000121032 630 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm11965-201ENSMUST00000122017 277 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim28Q62318 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim28Q62318 Gm11281-201ENSMUST00000141391 576 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim28Q62318 Gm2855-201ENSMUST00000166765 456 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim28Q62318 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm25598-201ENSMUST00000179031 107 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm23003-201ENSMUST00000179948 107 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Mir6341-201ENSMUST00000183490 121 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm37219-201ENSMUST00000192036 926 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim28Q62318 Gm44989-201ENSMUST00000204749 217 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim28Q62318 Gm44817-201ENSMUST00000205416 453 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim28Q62318 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Gm10264-201ENSMUST00000220589 429 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim28Q62318 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim28Q62318 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim28Q62318 Gm26064-201ENSMUST00000083381 109 ntBASIC5.34□□□□□ -1.55
Trim28Q62318 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim28Q62318 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim28Q62318 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.34□□□□□ -1.56
Trim28Q62318 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.34□□□□□ -1.56
Trim28Q62318 Zfp640-202ENSMUST00000224116 1562 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim28Q62318 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
Trim28Q62318 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Trim28Q62318 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim28Q62318 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l9-201ENSMUST00000101891 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm23942-201ENSMUST00000101956 107 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm26504-201ENSMUST00000102033 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trim28Q62318 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim28Q62318 Gm14991-201ENSMUST00000119913 598 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm11931-201ENSMUST00000121630 447 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm15885-201ENSMUST00000122114 388 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim28Q62318 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim28Q62318 Gm23435-201ENSMUST00000157183 156 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm17060-201ENSMUST00000172394 824 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim28Q62318 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim28Q62318 Gm22258-201ENSMUST00000177645 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm26502-201ENSMUST00000177732 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l13-201ENSMUST00000177737 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm25350-201ENSMUST00000177849 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l15-201ENSMUST00000177940 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm23446-201ENSMUST00000177977 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l4-201ENSMUST00000177982 94 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms