Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Scaf1Q5U4C3 Gm3972-201ENSMUST00000173960 2861 ntBASIC7.08□□□□□ -1.28
Scaf1Q5U4C3 Gm19131-202ENSMUST00000203464 3208 ntBASIC7.08□□□□□ -1.28
Scaf1Q5U4C3 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Scaf1Q5U4C3 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Scaf1Q5U4C3 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC7.08□□□□□ -1.28
Scaf1Q5U4C3 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm43010-201ENSMUST00000195993 2878 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm24170-201ENSMUST00000104124 133 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Mir669g-201ENSMUST00000116809 123 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm12226-201ENSMUST00000144172 876 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Mir1946b-201ENSMUST00000157853 133 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm24520-201ENSMUST00000179510 110 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm21673-201ENSMUST00000186640 436 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm21135-201ENSMUST00000189023 436 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm28769-201ENSMUST00000190176 615 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm38167-201ENSMUST00000195704 1178 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm44472-201ENSMUST00000204922 943 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm45387-201ENSMUST00000209792 632 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 AC117240.2-201ENSMUST00000220921 263 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 AC154239.1-201ENSMUST00000228565 406 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm6462-201ENSMUST00000081488 304 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm23508-201ENSMUST00000083079 72 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Gm44801-201ENSMUST00000207644 2060 ntBASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf1Q5U4C3 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm43312-201ENSMUST00000201655 2466 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm12255-201ENSMUST00000117184 284 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm13228-201ENSMUST00000118937 634 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm13435-201ENSMUST00000120111 1023 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm22312-201ENSMUST00000158005 130 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm23700-201ENSMUST00000158842 102 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm25019-201ENSMUST00000179732 110 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm2950-201ENSMUST00000185530 520 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm4854-201ENSMUST00000185902 574 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm3010-201ENSMUST00000198805 448 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm4321-201ENSMUST00000200520 442 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm43794-201ENSMUST00000200971 692 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm43440-201ENSMUST00000201957 729 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm44371-201ENSMUST00000204148 467 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm44959-201ENSMUST00000209127 231 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm6303-201ENSMUST00000210123 471 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm9309-201ENSMUST00000223537 546 ntBASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC7.06□□□□□ -1.28
Scaf1Q5U4C3 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm24578-201ENSMUST00000103970 129 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm14638-201ENSMUST00000121338 216 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm14765-201ENSMUST00000121954 326 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm23068-201ENSMUST00000158239 293 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Mir6413-201ENSMUST00000184049 108 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm42665-201ENSMUST00000202100 586 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm45422-201ENSMUST00000211476 246 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 AC211878.2-201ENSMUST00000222486 488 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 AC154305.1-201ENSMUST00000224443 450 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms