Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm23532-201ENSMUST00000104569 112 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm11372-201ENSMUST00000117348 570 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm14810-201ENSMUST00000121628 486 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm14559-201ENSMUST00000121745 496 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm25185-201ENSMUST00000157754 96 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm20399-201ENSMUST00000174652 132 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Mir6238-201ENSMUST00000184140 129 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm28596-201ENSMUST00000185870 696 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm28926-201ENSMUST00000191063 680 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm32295-201ENSMUST00000192558 696 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm31260-201ENSMUST00000193478 696 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm36382-201ENSMUST00000198892 541 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm19233-201ENSMUST00000219772 936 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm30738-201ENSMUST00000221346 502 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm15268-201ENSMUST00000118845 352 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm14541-201ENSMUST00000118985 157 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm11387-201ENSMUST00000120266 772 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm12543-201ENSMUST00000120410 543 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm12881-201ENSMUST00000121191 203 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm23702-201ENSMUST00000158840 130 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm17177-201ENSMUST00000169144 483 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm17153-201ENSMUST00000171314 490 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm27392-201ENSMUST00000185041 101 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm28872-201ENSMUST00000191518 158 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm4859-201ENSMUST00000199625 787 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm4263-202ENSMUST00000221392 667 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm18921-201ENSMUST00000221798 366 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm12582-201ENSMUST00000030555 697 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm23736-201ENSMUST00000082553 75 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm25004-201ENSMUST00000083811 161 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trafd1Q3UDK1 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm22019-201ENSMUST00000104359 96 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm14890-201ENSMUST00000117660 676 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm14771-201ENSMUST00000118249 203 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm14687-201ENSMUST00000120206 363 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm13131-201ENSMUST00000122228 321 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm23792-201ENSMUST00000122557 93 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm22480-201ENSMUST00000122568 128 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm23592-201ENSMUST00000157859 117 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms