Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm44961-201ENSMUST00000207450 196 ntBASIC5.33□□□□□ -1.56
Rnf180Q3U827 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Rnf180Q3U827 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC5.33□□□□□ -1.56
Rnf180Q3U827 AV026068-237ENSMUST00000226075 572 ntBASIC5.33□□□□□ -1.56
Rnf180Q3U827 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Rnf180Q3U827 Rny3-201ENSMUST00000083011 102 ntBASIC5.33□□□□□ -1.56
Rnf180Q3U827 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Rnf180Q3U827 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Rnf180Q3U827 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Rnf180Q3U827 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Rnf180Q3U827 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.33□□□□□ -1.56
Rnf180Q3U827 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Rnf180Q3U827 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.33□□□□□ -1.56
Rnf180Q3U827 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Rnf180Q3U827 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.33□□□□□ -1.56
Rnf180Q3U827 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm14785-201ENSMUST00000120185 539 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm12893-201ENSMUST00000121732 275 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm14411-201ENSMUST00000121798 914 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm22345-201ENSMUST00000122644 107 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm22320-201ENSMUST00000157149 312 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm26036-201ENSMUST00000158149 144 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm16290-201ENSMUST00000161175 474 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Trav15d-3-201ENSMUST00000198604 167 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm18672-201ENSMUST00000208035 270 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm7495-201ENSMUST00000215099 426 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm46994-201ENSMUST00000221523 219 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 AC158392.2-201ENSMUST00000225402 969 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Rnf180Q3U827 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Rnf180Q3U827 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Rnf180Q3U827 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.32□□□□□ -1.56
Rnf180Q3U827 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Rnf180Q3U827 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm7834-201ENSMUST00000117560 437 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm13349-201ENSMUST00000118436 411 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm15745-201ENSMUST00000119807 115 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm24371-201ENSMUST00000122662 267 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm18522-201ENSMUST00000173947 650 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm22120-201ENSMUST00000175590 70 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm20612-201ENSMUST00000176318 236 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm25412-201ENSMUST00000180258 107 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm29031-201ENSMUST00000185316 614 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm29000-201ENSMUST00000185444 614 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm28204-201ENSMUST00000185934 614 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm28290-201ENSMUST00000186505 614 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm28161-201ENSMUST00000186669 614 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm28802-201ENSMUST00000188624 944 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm28749-209ENSMUST00000189599 614 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm36998-201ENSMUST00000193205 704 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm33163-201ENSMUST00000194504 614 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm43007-201ENSMUST00000197618 291 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm18903-201ENSMUST00000215343 480 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm29809-201ENSMUST00000218423 493 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 AC101677.1-201ENSMUST00000218590 158 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm29774-201ENSMUST00000219270 436 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 AC164117.2-201ENSMUST00000222090 327 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 AC159619.2-201ENSMUST00000222924 401 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm22810-201ENSMUST00000082741 158 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 Gm22265-201ENSMUST00000082947 116 ntBASIC5.31□□□□□ -1.56
Rnf180Q3U827 AF357428-201ENSMUST00000083815 69 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms