Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm24144-201ENSMUST00000082632 111 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm23815-201ENSMUST00000083231 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm24490-201ENSMUST00000083803 98 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm23846-201ENSMUST00000083835 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm23520-201ENSMUST00000093736 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm10794-201ENSMUST00000099624 207 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.15□□□□□ -1.74
Col28a1Q2UY11 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Col28a1Q2UY11 Gm38699-201ENSMUST00000221301 1740 ntBASIC4.15□□□□□ -1.74
Col28a1Q2UY11 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col28a1Q2UY11 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.15□□□□□ -1.74
Col28a1Q2UY11 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Col28a1Q2UY11 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col28a1Q2UY11 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.15□□□□□ -1.74
Col28a1Q2UY11 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Col28a1Q2UY11 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Mir467h-201ENSMUST00000116759 121 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Mir1193-201ENSMUST00000116761 121 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm14197-201ENSMUST00000117480 1049 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm12852-201ENSMUST00000119478 719 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm15266-201ENSMUST00000119635 255 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm13737-201ENSMUST00000119793 232 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm7916-201ENSMUST00000120325 456 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm14303-201ENSMUST00000121320 171 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm22514-201ENSMUST00000122547 308 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm22613-201ENSMUST00000122679 292 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm25224-201ENSMUST00000158195 68 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm26402-201ENSMUST00000158499 113 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Mup-ps7-201ENSMUST00000178292 545 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm22243-201ENSMUST00000178754 120 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm28412-201ENSMUST00000187243 177 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm29335-201ENSMUST00000188361 459 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm37828-201ENSMUST00000192496 432 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm17906-201ENSMUST00000202480 901 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm19131-201ENSMUST00000203408 789 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm44254-201ENSMUST00000204184 322 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm45316-201ENSMUST00000210128 162 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm45344-201ENSMUST00000211610 341 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm31931-201ENSMUST00000219666 222 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm23928-201ENSMUST00000082469 145 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm26108-201ENSMUST00000083973 191 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm21286-201ENSMUST00000098035 545 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
Col28a1Q2UY11 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col28a1Q2UY11 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms