Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm7093-201ENSMUST00000223004 581 ntBASIC6□□□□□ -1.45
Col9a1Q05722 AC133189.2-201ENSMUST00000228527 392 ntBASIC6□□□□□ -1.45
Col9a1Q05722 AC164437.2-201ENSMUST00000228915 797 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Gm6065-201ENSMUST00000081336 492 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Gm23454-201ENSMUST00000083332 133 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col9a1Q05722 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6□□□□□ -1.45
Col9a1Q05722 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 AC101945.4-201ENSMUST00000228464 1976 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Gm38257-201ENSMUST00000195881 2761 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Gm37551-201ENSMUST00000195556 2861 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col9a1Q05722 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Col9a1Q05722 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm24671-201ENSMUST00000104159 158 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm13714-201ENSMUST00000117313 221 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm13457-201ENSMUST00000117885 267 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm8692-201ENSMUST00000118102 438 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm24131-201ENSMUST00000158539 107 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm8214-201ENSMUST00000172123 351 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Mir6367-201ENSMUST00000183385 102 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm29592-201ENSMUST00000189434 370 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm37162-201ENSMUST00000191708 551 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.99□□□□□ -1.45
Col9a1Q05722 AC151902.2-201ENSMUST00000226419 301 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC5.99□□□□□ -1.45
Col9a1Q05722 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Gm37364-201ENSMUST00000192533 3920 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col9a1Q05722 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC5.99□□□□□ -1.45
Col9a1Q05722 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col9a1Q05722 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm43707-201ENSMUST00000196451 3187 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm14914-201ENSMUST00000117576 2031 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Snord66-201ENSMUST00000104051 75 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm12797-201ENSMUST00000118645 273 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm3788-201ENSMUST00000119949 136 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm26023-201ENSMUST00000122722 313 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm4916-201ENSMUST00000126139 642 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm5958-201ENSMUST00000147698 297 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm25863-201ENSMUST00000158249 329 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm16269-201ENSMUST00000160532 409 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Mir6540-201ENSMUST00000184886 108 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm8319-201ENSMUST00000205708 641 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms