Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC2.89□□□□□ -1.95
Nkx3-1P97436 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC2.89□□□□□ -1.95
Nkx3-1P97436 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC2.89□□□□□ -1.95
Nkx3-1P97436 AC117656.3-202ENSMUST00000225842 1055 ntBASIC2.89□□□□□ -1.95
Nkx3-1P97436 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Nkx3-1P97436 Gm9845-201ENSMUST00000056409 598 ntBASIC2.89□□□□□ -1.95
Nkx3-1P97436 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC2.89□□□□□ -1.95
Nkx3-1P97436 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Nkx3-1P97436 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.89□□□□□ -1.95
Nkx3-1P97436 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Nkx3-1P97436 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Nkx3-1P97436 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Nkx3-1P97436 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Nkx3-1P97436 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Nkx3-1P97436 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.89□□□□□ -1.95
Nkx3-1P97436 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm6982-201ENSMUST00000118752 1560 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Snord65-201ENSMUST00000104269 72 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm3123-201ENSMUST00000163480 480 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm18604-201ENSMUST00000172535 558 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm26933-201ENSMUST00000182320 827 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm27864-201ENSMUST00000183704 190 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Mir6374-201ENSMUST00000184003 107 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm7634-201ENSMUST00000185778 553 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm29104-201ENSMUST00000186304 222 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm28785-201ENSMUST00000187478 379 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm6510-201ENSMUST00000195916 574 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm44690-201ENSMUST00000207984 382 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx3-1P97436 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC2.88□□□□□ -1.95
Nkx3-1P97436 AC139376.1-201ENSMUST00000220056 1250 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 AC105407.3-201ENSMUST00000224161 648 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 AC122937.1-201ENSMUST00000226405 793 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Nkx3-1P97436 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.88□□□□□ -1.95
Nkx3-1P97436 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx3-1P97436 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm11576-201ENSMUST00000117433 417 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm12401-201ENSMUST00000118435 228 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm14905-201ENSMUST00000122351 639 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm23441-201ENSMUST00000157268 127 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm23116-201ENSMUST00000158481 67 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm20162-201ENSMUST00000193629 871 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm18384-201ENSMUST00000195974 808 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm44972-201ENSMUST00000206419 406 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm44754-201ENSMUST00000208155 400 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 AC160931.2-201ENSMUST00000221445 351 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 CT030194.2-201ENSMUST00000225752 379 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm26129-201ENSMUST00000082719 107 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.87□□□□□ -1.95
Nkx3-1P97436 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx3-1P97436 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Nkx3-1P97436 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
Nkx3-1P97436 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm13443-201ENSMUST00000120770 555 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm14810-201ENSMUST00000121628 486 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm15157-201ENSMUST00000121852 702 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm22254-201ENSMUST00000179186 110 ntBASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Nkx3-1P97436 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms