Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm27161-201ENSMUST00000183960 562 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm29640-201ENSMUST00000187972 278 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm37523-201ENSMUST00000194901 412 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Nras-ps2-201ENSMUST00000195269 178 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm8069-201ENSMUST00000197887 154 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm43028-201ENSMUST00000202561 481 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb1P63158 AC153361.1-201ENSMUST00000219679 247 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm19540-201ENSMUST00000221843 810 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm40598-201ENSMUST00000222953 547 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm22304-201ENSMUST00000082688 129 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm22740-201ENSMUST00000083439 109 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm23733-201ENSMUST00000083750 106 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Hmgb1P63158 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Hmgb1P63158 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hmgb1P63158 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm15297-201ENSMUST00000117795 290 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm15312-201ENSMUST00000118827 271 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm11829-201ENSMUST00000121003 282 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm15309-201ENSMUST00000121644 240 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm24836-201ENSMUST00000122609 108 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm26373-201ENSMUST00000157833 103 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm25923-201ENSMUST00000158312 138 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm25413-201ENSMUST00000158544 312 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm17183-201ENSMUST00000171170 493 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm27457-201ENSMUST00000184771 156 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm28666-201ENSMUST00000186649 274 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.02□□□□□ -1.61
Hmgb1P63158 Igkv2-105-201ENSMUST00000196931 377 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm7675-201ENSMUST00000208828 686 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm18258-201ENSMUST00000210413 542 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm6049-201ENSMUST00000222369 458 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm23099-201ENSMUST00000083454 139 ntBASIC5.02□□□□□ -1.61
Hmgb1P63158 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb1P63158 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.02□□□□□ -1.61
Hmgb1P63158 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hmgb1P63158 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb1P63158 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb1P63158 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb1P63158 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 n-R5s52-201ENSMUST00000104614 113 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm15060-201ENSMUST00000119550 948 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm13751-201ENSMUST00000120280 752 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm14649-201ENSMUST00000121814 324 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm25967-201ENSMUST00000157168 147 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm5277-201ENSMUST00000164923 556 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Mir6921-201ENSMUST00000183719 80 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm43489-201ENSMUST00000196810 993 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm44125-201ENSMUST00000203068 448 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm44054-201ENSMUST00000203814 372 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm44208-201ENSMUST00000205199 421 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm45023-201ENSMUST00000207951 379 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm18442-201ENSMUST00000220925 639 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.01□□□□□ -1.61
Hmgb1P63158 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hmgb1P63158 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Snord15b-201ENSMUST00000083032 145 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm24031-201ENSMUST00000083930 131 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb1P63158 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb1P63158 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb1P63158 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.01□□□□□ -1.61
Hmgb1P63158 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb1P63158 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms