Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox1P53783 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.35□□□□□ -1.55
Sox1P53783 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm2719-201ENSMUST00000191929 444 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm43444-201ENSMUST00000198123 291 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm44274-201ENSMUST00000203417 256 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm18462-201ENSMUST00000208112 417 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm44853-201ENSMUST00000209070 250 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm6012-201ENSMUST00000210821 730 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox1P53783 Gm2645-201ENSMUST00000223516 547 ntBASIC5.35□□□□□ -1.55
Sox1P53783 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.35□□□□□ -1.55
Sox1P53783 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sox1P53783 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox1P53783 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sox1P53783 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox1P53783 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sox1P53783 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox1P53783 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox1P53783 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Synpr-207ENSMUST00000223583 3362 ntBASIC5.35□□□□□ -1.55
Sox1P53783 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox1P53783 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Sox1P53783 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Sox1P53783 Gm12739-201ENSMUST00000119769 382 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sox1P53783 Gm23993-201ENSMUST00000157478 144 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox1P53783 Mir3964-201ENSMUST00000174898 74 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Gm23872-201ENSMUST00000175432 77 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Gm4845-201ENSMUST00000179202 562 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sox1P53783 Gm28967-201ENSMUST00000187351 281 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sox1P53783 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.34□□□□□ -1.55
Sox1P53783 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.34□□□□□ -1.55
Sox1P53783 Gm44083-201ENSMUST00000203114 337 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Gm44765-201ENSMUST00000206927 601 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox1P53783 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.34□□□□□ -1.55
Sox1P53783 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sox1P53783 Gm7040-201ENSMUST00000223271 443 ntBASIC5.34□□□□□ -1.55
Sox1P53783 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Mecom-201ENSMUST00000061088 348 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox1P53783 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.34□□□□□ -1.55
Sox1P53783 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox1P53783 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.34□□□□□ -1.55
Sox1P53783 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sox1P53783 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.34□□□□□ -1.56
Sox1P53783 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Sox1P53783 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Sox1P53783 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Sox1P53783 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sox1P53783 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Sox1P53783 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.34□□□□□ -1.56
Sox1P53783 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sox1P53783 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.33□□□□□ -1.56
Sox1P53783 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox1P53783 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox1P53783 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sox1P53783 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Sox1P53783 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Gm24889-201ENSMUST00000104388 132 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm12112-201ENSMUST00000117772 231 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm14142-201ENSMUST00000117833 296 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm11227-201ENSMUST00000119774 471 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm11388-201ENSMUST00000120908 159 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm14577-201ENSMUST00000121134 256 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.33□□□□□ -1.56
Sox1P53783 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Mir5099-201ENSMUST00000175257 74 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.33□□□□□ -1.56
Sox1P53783 Gm22911-201ENSMUST00000177920 107 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm23660-201ENSMUST00000178362 79 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sox1P53783 Gm24088-201ENSMUST00000179100 79 ntBASIC5.33□□□□□ -1.56
Sox1P53783 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Gm8296-201ENSMUST00000185597 524 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm28717-201ENSMUST00000189950 315 ntBASIC5.33□□□□□ -1.56
Sox1P53783 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.33□□□□□ -1.56
Sox1P53783 Gm26128-201ENSMUST00000083170 110 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.33□□□□□ -1.56
Sox1P53783 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox1P53783 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Sox1P53783 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.33□□□□□ -1.56
Sox1P53783 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Sox1P53783 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms