Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Shmt1P50431 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Shmt1P50431 Gm37661-201ENSMUST00000191863 1550 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.8□□□□□ -1.64
Shmt1P50431 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm13711-201ENSMUST00000119708 453 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm14867-201ENSMUST00000120156 866 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Shmt1P50431 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm7846-201ENSMUST00000145844 274 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm25970-201ENSMUST00000157165 86 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm25427-201ENSMUST00000157605 103 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Shmt1P50431 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.8□□□□□ -1.64
Shmt1P50431 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm25397-201ENSMUST00000176951 92 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Mir6391-201ENSMUST00000184391 104 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm5058-201ENSMUST00000187331 463 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm5372-201ENSMUST00000187540 409 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm28974-201ENSMUST00000187893 231 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.8□□□□□ -1.64
Shmt1P50431 Gm37111-201ENSMUST00000193250 634 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.8□□□□□ -1.64
Shmt1P50431 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm42594-201ENSMUST00000199511 246 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm17811-201ENSMUST00000206193 387 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm44923-201ENSMUST00000206673 85 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.8□□□□□ -1.64
Shmt1P50431 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm45344-201ENSMUST00000211610 341 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.8□□□□□ -1.64
Shmt1P50431 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.8□□□□□ -1.64
Shmt1P50431 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 AC104832.1-201ENSMUST00000222938 550 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 AC163646.2-201ENSMUST00000227962 141 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Shmt1P50431 Gm26107-201ENSMUST00000083972 107 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Shmt1P50431 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Shmt1P50431 Neat1-201ENSMUST00000173672 20771 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.8□□□□□ -1.64
Shmt1P50431 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Shmt1P50431 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Shmt1P50431 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Shmt1P50431 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Shmt1P50431 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Shmt1P50431 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm25213-201ENSMUST00000102388 113 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm23746-201ENSMUST00000104229 125 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm12190-201ENSMUST00000120001 187 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm22958-201ENSMUST00000122512 184 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.79□□□□□ -1.64
Shmt1P50431 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.79□□□□□ -1.64
Shmt1P50431 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm23638-201ENSMUST00000175073 126 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm23158-201ENSMUST00000175076 126 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm22907-201ENSMUST00000175198 126 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm22625-201ENSMUST00000175382 126 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm22875-201ENSMUST00000175449 126 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm25197-201ENSMUST00000175516 126 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm27857-201ENSMUST00000176930 126 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm22395-201ENSMUST00000177427 96 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm26268-201ENSMUST00000177685 126 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm23681-201ENSMUST00000178821 126 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm20773-201ENSMUST00000178940 681 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm27883-201ENSMUST00000183941 102 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm27940-201ENSMUST00000184449 98 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.79□□□□□ -1.64
Shmt1P50431 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm38234-201ENSMUST00000195204 421 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm43494-201ENSMUST00000197672 388 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.79□□□□□ -1.64
Shmt1P50431 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms