Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm42681-201ENSMUST00000197999 1611 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm24273-201ENSMUST00000102332 164 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm15125-201ENSMUST00000116185 800 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm23987-201ENSMUST00000117039 129 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm14816-201ENSMUST00000117174 294 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm12486-201ENSMUST00000120887 541 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm6591-201ENSMUST00000121063 434 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm11389-201ENSMUST00000121407 430 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm12358-201ENSMUST00000121842 520 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm23231-201ENSMUST00000157299 104 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm25264-201ENSMUST00000158519 117 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm22135-201ENSMUST00000158752 108 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm20648-201ENSMUST00000175815 328 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm21756-201ENSMUST00000178380 930 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm21405-201ENSMUST00000179024 930 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm21191-201ENSMUST00000186484 930 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm28847-201ENSMUST00000186778 700 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm29365-201ENSMUST00000189461 699 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm28920-201ENSMUST00000189957 699 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm18181-201ENSMUST00000190670 736 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm29503-201ENSMUST00000191044 930 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm38046-201ENSMUST00000192733 550 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm17893-201ENSMUST00000203017 770 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm43975-201ENSMUST00000203023 481 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm44282-201ENSMUST00000203199 190 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx2-1P50220 AC109214.2-201ENSMUST00000220089 358 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 AC117240.2-201ENSMUST00000220921 263 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Apoo-ps-201ENSMUST00000061241 586 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx2-1P50220 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm37598-201ENSMUST00000194506 1301 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 AC134860.3-201ENSMUST00000223564 1300 ntBASIC3.37□□□□□ -1.87
Nkx2-1P50220 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Nkx2-1P50220 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx2-1P50220 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Nkx2-1P50220 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Nkx2-1P50220 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx2-1P50220 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.36□□□□□ -1.87
Nkx2-1P50220 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.36□□□□□ -1.87
Nkx2-1P50220 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx2-1P50220 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx2-1P50220 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx2-1P50220 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Nkx2-1P50220 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Nkx2-1P50220 Gm25560-201ENSMUST00000104606 176 ntBASIC3.36□□□□□ -1.87
Nkx2-1P50220 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.36□□□□□ -1.87
Nkx2-1P50220 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.36□□□□□ -1.87
Nkx2-1P50220 Gm22032-201ENSMUST00000116946 116 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms