Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm37698-201ENSMUST00000192605 463 ntBASIC3.33□□□□□ -1.88
Sox6P40645 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.33□□□□□ -1.88
Sox6P40645 Gm35876-201ENSMUST00000205044 459 ntBASIC3.33□□□□□ -1.88
Sox6P40645 Gm45379-201ENSMUST00000211772 549 ntBASIC3.33□□□□□ -1.88
Sox6P40645 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.33□□□□□ -1.88
Sox6P40645 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.33□□□□□ -1.88
Sox6P40645 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.33□□□□□ -1.88
Sox6P40645 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Sox6P40645 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Sox6P40645 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Sox6P40645 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.33□□□□□ -1.88
Sox6P40645 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Sox6P40645 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Sox6P40645 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.33□□□□□ -1.88
Sox6P40645 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Sox6P40645 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Sox6P40645 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.33□□□□□ -1.88
Sox6P40645 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.33□□□□□ -1.88
Sox6P40645 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Sox6P40645 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.32□□□□□ -1.88
Sox6P40645 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Sox6P40645 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sox6P40645 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sox6P40645 Gm25185-201ENSMUST00000157754 96 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Gm23583-201ENSMUST00000158533 289 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sox6P40645 Mir5710-201ENSMUST00000176884 69 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Gm20693-201ENSMUST00000177431 211 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.32□□□□□ -1.88
Sox6P40645 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Sox6P40645 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC3.32□□□□□ -1.88
Sox6P40645 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.32□□□□□ -1.88
Sox6P40645 Gm37001-201ENSMUST00000193377 190 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.32□□□□□ -1.88
Sox6P40645 Gm2314-201ENSMUST00000200391 586 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Gm44548-201ENSMUST00000208929 192 ntBASIC3.32□□□□□ -1.88
Sox6P40645 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.32□□□□□ -1.88
Sox6P40645 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Sox6P40645 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Sox6P40645 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Gm8074-201ENSMUST00000095071 252 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Sox6P40645 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Sox6P40645 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sox6P40645 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Sox6P40645 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sox6P40645 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.32□□□□□ -1.88
Sox6P40645 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.32□□□□□ -1.88
Sox6P40645 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sox6P40645 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Sox6P40645 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
Sox6P40645 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sox6P40645 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sox6P40645 Mir690-201ENSMUST00000102110 109 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm24273-201ENSMUST00000102332 164 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sox6P40645 Gm15161-201ENSMUST00000117340 387 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm15382-201ENSMUST00000118011 537 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm15268-201ENSMUST00000118845 352 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm15387-201ENSMUST00000120421 648 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sox6P40645 Gm12578-201ENSMUST00000121244 417 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.31□□□□□ -1.88
Sox6P40645 Gm23540-201ENSMUST00000157543 164 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox6P40645 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm25598-201ENSMUST00000179031 107 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm27189-201ENSMUST00000184119 190 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Mir6975-201ENSMUST00000184879 61 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm27538-201ENSMUST00000185065 294 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.31□□□□□ -1.88
Sox6P40645 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.31□□□□□ -1.88
Sox6P40645 Gm38053-201ENSMUST00000193938 160 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Trbv8-201ENSMUST00000194020 285 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm43930-201ENSMUST00000203868 845 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.31□□□□□ -1.88
Sox6P40645 Gm45778-201ENSMUST00000211959 153 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm35857-201ENSMUST00000212739 178 ntBASIC3.31□□□□□ -1.88
Sox6P40645 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.31□□□□□ -1.88
Sox6P40645 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.31□□□□□ -1.88
Sox6P40645 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox6P40645 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox6P40645 Gm25205-201ENSMUST00000082841 103 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm5518-201ENSMUST00000084171 648 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Gm10212-201ENSMUST00000087884 324 ntBASIC3.31□□□□□ -1.88
Sox6P40645 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Sox6P40645 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Sox6P40645 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Sox6P40645 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sox6P40645 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms