Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col2a1P28481 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col2a1P28481 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col2a1P28481 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col2a1P28481 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.57□□□□□ -1.84
Col2a1P28481 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col2a1P28481 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Col2a1P28481 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Col2a1P28481 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col2a1P28481 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col2a1P28481 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Col2a1P28481 Gm12849-201ENSMUST00000120013 739 ntBASIC3.56□□□□□ -1.84
Col2a1P28481 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.56□□□□□ -1.84
Col2a1P28481 Gm6245-201ENSMUST00000164699 768 ntBASIC3.56□□□□□ -1.84
Col2a1P28481 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col2a1P28481 Gm20651-201ENSMUST00000177219 329 ntBASIC3.56□□□□□ -1.84
Col2a1P28481 Gm4761-201ENSMUST00000178086 582 ntBASIC3.56□□□□□ -1.84
Col2a1P28481 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col2a1P28481 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col2a1P28481 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC3.56□□□□□ -1.84
Col2a1P28481 Gm36994-201ENSMUST00000192941 492 ntBASIC3.56□□□□□ -1.84
Col2a1P28481 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col2a1P28481 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col2a1P28481 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.56□□□□□ -1.84
Col2a1P28481 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col2a1P28481 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col2a1P28481 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col2a1P28481 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col2a1P28481 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.56□□□□□ -1.84
Col2a1P28481 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.56□□□□□ -1.84
Col2a1P28481 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col2a1P28481 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col2a1P28481 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col2a1P28481 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Col2a1P28481 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Col2a1P28481 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.55□□□□□ -1.84
Col2a1P28481 Gm4222-201ENSMUST00000165784 470 ntBASIC3.55□□□□□ -1.84
Col2a1P28481 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Mir5123-201ENSMUST00000177794 83 ntBASIC3.55□□□□□ -1.84
Col2a1P28481 Gm10925-201ENSMUST00000189941 678 ntBASIC3.55□□□□□ -1.84
Col2a1P28481 Gm6064-201ENSMUST00000203999 454 ntBASIC3.55□□□□□ -1.84
Col2a1P28481 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.55□□□□□ -1.84
Col2a1P28481 Gm45778-201ENSMUST00000211959 153 ntBASIC3.55□□□□□ -1.84
Col2a1P28481 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.55□□□□□ -1.84
Col2a1P28481 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.55□□□□□ -1.84
Col2a1P28481 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col2a1P28481 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col2a1P28481 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col2a1P28481 Gm43216-201ENSMUST00000196295 1333 ntBASIC3.55□□□□□ -1.84
Col2a1P28481 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.55□□□□□ -1.84
Col2a1P28481 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col2a1P28481 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col2a1P28481 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Col2a1P28481 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col2a1P28481 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col2a1P28481 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col2a1P28481 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.54□□□□□ -1.84
Col2a1P28481 Gm12401-201ENSMUST00000118435 228 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm14840-201ENSMUST00000122135 594 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm24213-201ENSMUST00000158255 258 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm26215-201ENSMUST00000158584 139 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm18899-201ENSMUST00000217663 546 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col2a1P28481 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col2a1P28481 Snord7-201ENSMUST00000083781 97 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col2a1P28481 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col2a1P28481 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col2a1P28481 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC3.54□□□□□ -1.84
Col2a1P28481 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col2a1P28481 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
Col2a1P28481 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col2a1P28481 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col2a1P28481 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col2a1P28481 Gm13460-201ENSMUST00000121274 353 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm5123-201ENSMUST00000121905 837 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.54□□□□□ -1.84
Col2a1P28481 Gm14562-201ENSMUST00000129885 543 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm5755-201ENSMUST00000152394 837 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm17091-201ENSMUST00000163248 357 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm17187-201ENSMUST00000164622 410 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col2a1P28481 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.54□□□□□ -1.84
Col2a1P28481 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col2a1P28481 Gm44849-201ENSMUST00000207595 484 ntBASIC3.54□□□□□ -1.84
Col2a1P28481 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC3.54□□□□□ -1.84
Col2a1P28481 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col2a1P28481 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms