Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Sdc1P18828 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm8242-202ENSMUST00000193056 475 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm44266-201ENSMUST00000205235 500 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.95□□□□□ -1.94
Sdc1P18828 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.95□□□□□ -1.94
Sdc1P18828 AC134537.2-201ENSMUST00000217770 575 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm30738-201ENSMUST00000221346 502 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 AC125379.1-201ENSMUST00000221928 111 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm9628-201ENSMUST00000222169 725 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Sdc1P18828 AC154452.1-201ENSMUST00000225819 241 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sdc1P18828 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sdc1P18828 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Sdc1P18828 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sdc1P18828 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sdc1P18828 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sdc1P18828 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sdc1P18828 Gm25200-201ENSMUST00000083094 130 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Sdc1P18828 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Sdc1P18828 AC154634.4-201ENSMUST00000226077 2665 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Sdc1P18828 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC2.94□□□□□ -1.94
Sdc1P18828 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
Sdc1P18828 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Sdc1P18828 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Sdc1P18828 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Sdc1P18828 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Sdc1P18828 Gm15854-201ENSMUST00000118879 808 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm13471-201ENSMUST00000122057 433 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm14253-201ENSMUST00000122112 639 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.94□□□□□ -1.94
Sdc1P18828 Gm16571-201ENSMUST00000159112 291 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Sdc1P18828 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Sdc1P18828 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
Sdc1P18828 Gm18486-201ENSMUST00000184040 298 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm28030-201ENSMUST00000184987 138 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm18800-202ENSMUST00000188688 1105 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC2.94□□□□□ -1.94
Sdc1P18828 Gm37629-201ENSMUST00000193635 1050 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Sdc1P18828 Gm9379-201ENSMUST00000196790 646 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm19131-201ENSMUST00000203408 789 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm45081-201ENSMUST00000206281 572 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm33626-201ENSMUST00000206790 828 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Sdc1P18828 Gm18598-201ENSMUST00000207724 597 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm19096-201ENSMUST00000209705 766 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Fth-ps3-201ENSMUST00000210405 358 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Gm45273-201ENSMUST00000211559 281 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Sdc1P18828 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Sdc1P18828 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Sdc1P18828 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Sdc1P18828 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Sdc1P18828 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Sdc1P18828 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Sdc1P18828 Gm6300-201ENSMUST00000192393 1498 ntBASIC2.94□□□□□ -1.94
Sdc1P18828 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Sdc1P18828 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Sdc1P18828 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm15125-201ENSMUST00000116185 800 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Gm14518-201ENSMUST00000117351 542 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Gm11698-201ENSMUST00000117948 455 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Gm14517-201ENSMUST00000119040 337 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Gm14810-201ENSMUST00000121628 486 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm26310-201ENSMUST00000157766 117 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Gm7241-201ENSMUST00000159853 357 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Sdc1P18828 Mir3106-201ENSMUST00000175401 82 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm28011-201ENSMUST00000184097 175 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Mir6537-201ENSMUST00000184150 110 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC2.93□□□□□ -1.94
Sdc1P18828 Gm38061-201ENSMUST00000192490 365 ntBASIC2.93□□□□□ -1.94
Sdc1P18828 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Sdc1P18828 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms