Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm25965-201ENSMUST00000157170 93 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 Gm25058-201ENSMUST00000157365 128 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 Gm22501-201ENSMUST00000158981 127 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 Gm6374-201ENSMUST00000159051 788 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 Gm16563-201ENSMUST00000162673 423 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx1P18111 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm9587-201ENSMUST00000172449 454 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm27899-201ENSMUST00000184715 64 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm29428-201ENSMUST00000190086 409 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx1P18111 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm35931-201ENSMUST00000203931 448 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.11□□□□□ -1.91
Cdx1P18111 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx1P18111 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx1P18111 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 Gm5548-201ENSMUST00000055878 397 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdx1P18111 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cdx1P18111 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx1P18111 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.11□□□□□ -1.91
Cdx1P18111 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx1P18111 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdx1P18111 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Cdx1P18111 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx1P18111 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cdx1P18111 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx1P18111 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx1P18111 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx1P18111 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdx1P18111 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Cdx1P18111 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
Cdx1P18111 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdx1P18111 Gm25169-201ENSMUST00000104190 129 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm7123-201ENSMUST00000117647 213 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm11367-201ENSMUST00000117802 120 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm12509-201ENSMUST00000118033 609 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm15126-201ENSMUST00000118631 833 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx1P18111 Gm24503-201ENSMUST00000158454 135 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm18604-201ENSMUST00000172535 558 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdx1P18111 Gm23215-201ENSMUST00000178153 121 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Mir7047-201ENSMUST00000184595 64 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdx1P18111 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdx1P18111 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx1P18111 Gm38061-201ENSMUST00000192490 365 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm43405-201ENSMUST00000198642 337 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm8132-201ENSMUST00000204938 640 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm9712-201ENSMUST00000210842 311 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm46998-201ENSMUST00000221444 330 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cdx1P18111 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdx1P18111 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdx1P18111 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdx1P18111 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdx1P18111 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx1P18111 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.1□□□□□ -1.91
Cdx1P18111 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx1P18111 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdx1P18111 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdx1P18111 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdx1P18111 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.09□□□□□ -1.91
Cdx1P18111 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cdx1P18111 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cdx1P18111 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Cdx1P18111 Gm24788-201ENSMUST00000104283 156 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm25560-201ENSMUST00000104606 176 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm12090-201ENSMUST00000118692 758 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm13678-201ENSMUST00000118926 340 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm12755-201ENSMUST00000122297 282 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm22453-201ENSMUST00000122801 318 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm25908-201ENSMUST00000157624 98 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm16569-201ENSMUST00000160526 314 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.09□□□□□ -1.91
Cdx1P18111 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm4761-201ENSMUST00000178086 582 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm28141-201ENSMUST00000186676 342 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms