Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm6501-201ENSMUST00000187178 916 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.27□□□□□ -1.89
ApoeP08226 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.27□□□□□ -1.89
ApoeP08226 Gm38201-201ENSMUST00000192143 387 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.27□□□□□ -1.89
ApoeP08226 Gm37684-201ENSMUST00000192779 355 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Gm37428-201ENSMUST00000193886 137 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Gm44300-201ENSMUST00000196792 121 ntBASIC3.27□□□□□ -1.89
ApoeP08226 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Gm6112-201ENSMUST00000208037 629 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.27□□□□□ -1.89
ApoeP08226 Gm18039-201ENSMUST00000217816 728 ntBASIC3.27□□□□□ -1.89
ApoeP08226 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.27□□□□□ -1.89
ApoeP08226 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.27□□□□□ -1.89
ApoeP08226 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ApoeP08226 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.27□□□□□ -1.89
ApoeP08226 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ApoeP08226 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ApoeP08226 Gm9818-201ENSMUST00000050900 255 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ApoeP08226 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ApoeP08226 Gm25205-201ENSMUST00000082841 103 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ApoeP08226 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
ApoeP08226 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.27□□□□□ -1.89
ApoeP08226 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
ApoeP08226 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ApoeP08226 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ApoeP08226 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm13567-201ENSMUST00000118026 247 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm13167-201ENSMUST00000118554 578 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm5762-201ENSMUST00000119204 258 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm12739-201ENSMUST00000119769 382 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm14253-201ENSMUST00000122112 639 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm15075-201ENSMUST00000122187 477 ntBASIC3.26□□□□□ -1.89
ApoeP08226 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ApoeP08226 Gm23671-201ENSMUST00000157472 103 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm25386-201ENSMUST00000157814 288 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm22211-201ENSMUST00000158097 156 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm24417-201ENSMUST00000178123 79 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm24653-201ENSMUST00000178541 79 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm25934-201ENSMUST00000178642 79 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.26□□□□□ -1.89
ApoeP08226 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ApoeP08226 Mir6921-201ENSMUST00000183719 80 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Mir6911-201ENSMUST00000184241 69 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.26□□□□□ -1.89
ApoeP08226 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.26□□□□□ -1.89
ApoeP08226 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.26□□□□□ -1.89
ApoeP08226 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ApoeP08226 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ApoeP08226 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm42474-201ENSMUST00000201073 505 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm45553-201ENSMUST00000209929 507 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm45327-201ENSMUST00000211612 565 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm18016-201ENSMUST00000216119 801 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
ApoeP08226 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ApoeP08226 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ApoeP08226 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.26□□□□□ -1.89
ApoeP08226 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ApoeP08226 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ApoeP08226 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.26□□□□□ -1.89
ApoeP08226 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ApoeP08226 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ApoeP08226 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ApoeP08226 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.25□□□□□ -1.89
ApoeP08226 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
ApoeP08226 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.25□□□□□ -1.89
ApoeP08226 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ApoeP08226 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
ApoeP08226 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ApoeP08226 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
ApoeP08226 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
ApoeP08226 Mir551b-201ENSMUST00000102165 98 ntBASIC3.25□□□□□ -1.89
ApoeP08226 Mir693-201ENSMUST00000102187 89 ntBASIC3.25□□□□□ -1.89
ApoeP08226 Gm14050-201ENSMUST00000117052 346 ntBASIC3.25□□□□□ -1.89
ApoeP08226 Gm11372-201ENSMUST00000117348 570 ntBASIC3.25□□□□□ -1.89
ApoeP08226 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.25□□□□□ -1.89
ApoeP08226 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.25□□□□□ -1.89
ApoeP08226 Gm25271-201ENSMUST00000157273 290 ntBASIC3.25□□□□□ -1.89
ApoeP08226 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms