Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trav13d-3J3QMG8 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.58□□□□□ -1.84
Trav13d-3J3QMG8 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trav13d-3J3QMG8 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
Trav13d-3J3QMG8 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.58□□□□□ -1.84
Trav13d-3J3QMG8 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.58□□□□□ -1.84
Trav13d-3J3QMG8 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trav13d-3J3QMG8 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trav13d-3J3QMG8 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm6587-201ENSMUST00000120219 613 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm16445-201ENSMUST00000120399 714 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm5646-201ENSMUST00000120568 714 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm25177-201ENSMUST00000122634 117 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm18417-201ENSMUST00000176564 648 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm3454-201ENSMUST00000185571 412 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm38270-201ENSMUST00000192721 407 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm8035-201ENSMUST00000204625 687 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm45209-201ENSMUST00000207122 353 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm46998-201ENSMUST00000221444 330 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.57□□□□□ -1.84
Trav13d-3J3QMG8 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm23319-201ENSMUST00000104467 131 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm24318-201ENSMUST00000104490 131 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm14125-201ENSMUST00000113442 680 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm16082-201ENSMUST00000115992 377 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm15151-201ENSMUST00000117106 177 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm15926-201ENSMUST00000120492 550 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm7618-201ENSMUST00000121643 171 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm17155-201ENSMUST00000165969 473 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm19807-201ENSMUST00000173971 667 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm22395-201ENSMUST00000177427 96 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm24520-201ENSMUST00000179510 110 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm28655-201ENSMUST00000191538 692 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm7182-201ENSMUST00000193351 732 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm43104-201ENSMUST00000197234 311 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 AC161456.1-201ENSMUST00000206771 887 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm18597-201ENSMUST00000209519 694 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm7380-201ENSMUST00000211599 466 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm18388-201ENSMUST00000222339 557 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Gm18026-201ENSMUST00000222789 727 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms