Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm23746-201ENSMUST00000104229 125 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm11221-201ENSMUST00000117230 597 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm12149-201ENSMUST00000117511 654 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm15951-201ENSMUST00000118377 400 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm11631-201ENSMUST00000119220 156 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm11825-201ENSMUST00000120710 736 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm12422-201ENSMUST00000121431 302 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm14972-201ENSMUST00000121780 364 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm25808-201ENSMUST00000122784 284 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm26086-201ENSMUST00000157902 263 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm26169-201ENSMUST00000158420 135 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm27854-201ENSMUST00000175578 244 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm23141-201ENSMUST00000178682 94 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm23191-201ENSMUST00000179147 107 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm25156-201ENSMUST00000179809 79 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm28872-201ENSMUST00000191518 158 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm18127-201ENSMUST00000208479 725 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm26228-201ENSMUST00000082512 107 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm25080-201ENSMUST00000082526 107 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm26330-201ENSMUST00000082817 104 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm22423-201ENSMUST00000082861 184 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm25518-201ENSMUST00000083864 107 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 AC121844.2-201ENSMUST00000219067 2066 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm6134-201ENSMUST00000117265 171 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm12039-201ENSMUST00000118219 180 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm22345-201ENSMUST00000122644 107 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm23214-201ENSMUST00000122716 157 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm24395-201ENSMUST00000158139 125 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm23793-201ENSMUST00000179396 117 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm29231-201ENSMUST00000179850 319 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Mir6971-201ENSMUST00000183497 63 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Mir7653-201ENSMUST00000184358 61 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm19641-201ENSMUST00000188432 417 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm36939-201ENSMUST00000194889 439 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm36954-201ENSMUST00000195362 363 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm44132-201ENSMUST00000205142 151 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm44655-201ENSMUST00000207768 423 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm5955-201ENSMUST00000222712 219 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm10064-201ENSMUST00000071235 399 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 n-R5s204-201ENSMUST00000082972 119 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm25792-201ENSMUST00000083289 100 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm22155-201ENSMUST00000083836 162 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms