Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm42993-201ENSMUST00000196856 7325 ntBASIC2.59□□□□□ -1.99
Chd6A3KFM7 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Chd6A3KFM7 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Chd6A3KFM7 Gm22187-201ENSMUST00000157819 129 ntBASIC2.59□□□□□ -1.99
Chd6A3KFM7 Gm19498-201ENSMUST00000191128 331 ntBASIC2.59□□□□□ -1.99
Chd6A3KFM7 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.59□□□□□ -1.99
Chd6A3KFM7 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.59□□□□□ -1.99
Chd6A3KFM7 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC2.59□□□□□ -1.99
Chd6A3KFM7 Gm13615-201ENSMUST00000120242 1612 ntBASIC2.59□□□□□ -1.99
Chd6A3KFM7 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Chd6A3KFM7 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC2.59□□□□□ -1.99
Chd6A3KFM7 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Chd6A3KFM7 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC2.59□□□□□ -2
Chd6A3KFM7 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
Chd6A3KFM7 Gm26015-201ENSMUST00000104402 125 ntBASIC2.59□□□□□ -2
Chd6A3KFM7 Gm15022-201ENSMUST00000122074 746 ntBASIC2.59□□□□□ -2
Chd6A3KFM7 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.59□□□□□ -2
Chd6A3KFM7 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.59□□□□□ -2
Chd6A3KFM7 Mir8119-201ENSMUST00000183371 129 ntBASIC2.59□□□□□ -2
Chd6A3KFM7 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.59□□□□□ -2
Chd6A3KFM7 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.59□□□□□ -2
Chd6A3KFM7 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC2.59□□□□□ -2
Chd6A3KFM7 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.59□□□□□ -2
Chd6A3KFM7 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Chd6A3KFM7 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.59□□□□□ -2
Chd6A3KFM7 Gm43834-201ENSMUST00000197097 4830 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm2033-201ENSMUST00000210753 2287 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm11896-201ENSMUST00000121105 820 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm15536-201ENSMUST00000121411 114 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.58□□□□□ -2
Chd6A3KFM7 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.58□□□□□ -2
Chd6A3KFM7 Gm38283-201ENSMUST00000193041 695 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.58□□□□□ -2
Chd6A3KFM7 Gm6230-201ENSMUST00000208077 780 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Chd6A3KFM7 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Chd6A3KFM7 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Chd6A3KFM7 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Chd6A3KFM7 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Chd6A3KFM7 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Chd6A3KFM7 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC2.58□□□□□ -2
Chd6A3KFM7 Mir466k-201ENSMUST00000116774 122 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm12954-201ENSMUST00000118610 611 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm12213-201ENSMUST00000119924 353 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm16420-201ENSMUST00000120258 856 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm8121-201ENSMUST00000153583 499 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm23671-201ENSMUST00000157472 103 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm23591-201ENSMUST00000157663 286 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm23257-201ENSMUST00000158322 132 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm36991-201ENSMUST00000191800 648 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Mir3087-201ENSMUST00000199405 56 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Chd6A3KFM7 Gm44623-201ENSMUST00000207934 434 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm45733-201ENSMUST00000212988 437 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm18015-201ENSMUST00000214879 316 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Snora33-201ENSMUST00000093556 129 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Chd6A3KFM7 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC2.58□□□□□ -2
Chd6A3KFM7 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.58□□□□□ -2
Chd6A3KFM7 Gm38260-201ENSMUST00000193573 3995 ntBASIC2.58□□□□□ -2
Chd6A3KFM7 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Chd6A3KFM7 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Chd6A3KFM7 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC2.57□□□□□ -2
Chd6A3KFM7 Gm16260-201ENSMUST00000155141 304 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC2.57□□□□□ -2
Chd6A3KFM7 Gm8282-201ENSMUST00000187559 483 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.57□□□□□ -2
Chd6A3KFM7 Gm38088-201ENSMUST00000195829 241 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 Gm34314-201ENSMUST00000203622 367 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 Gm20997-201ENSMUST00000205148 231 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Chd6A3KFM7 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Chd6A3KFM7 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC2.57□□□□□ -2
Chd6A3KFM7 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Chd6A3KFM7 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 Gm22803-201ENSMUST00000158049 283 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 Gm27369-201ENSMUST00000185182 71 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Chd6A3KFM7 Gm20776-201ENSMUST00000189940 700 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC2.57□□□□□ -2
Chd6A3KFM7 Gm37684-201ENSMUST00000192779 355 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC2.57□□□□□ -2
Chd6A3KFM7 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.57□□□□□ -2
Chd6A3KFM7 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Chd6A3KFM7 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Chd6A3KFM7 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 Gm36951-201ENSMUST00000193840 2687 ntBASIC2.57□□□□□ -2
Chd6A3KFM7 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.57□□□□□ -2
Chd6A3KFM7 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
Chd6A3KFM7 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Chd6A3KFM7 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.56□□□□□ -2
Chd6A3KFM7 AC158921.1-201ENSMUST00000227861 3468 ntBASIC2.56□□□□□ -2
Chd6A3KFM7 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC2.56□□□□□ -2
Chd6A3KFM7 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.56□□□□□ -2
Chd6A3KFM7 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms