Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm7422-201ENSMUST00000220115 640 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col6a4A2AX52 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Col6a4A2AX52 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Col6a4A2AX52 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.53□□□□□ -2.01
Col6a4A2AX52 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm37311-201ENSMUST00000195541 2024 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm14821-201ENSMUST00000121975 435 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm22227-201ENSMUST00000157356 259 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm2427-201ENSMUST00000189121 881 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm29038-201ENSMUST00000191543 678 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Ighv8-1-201ENSMUST00000194897 291 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm37989-201ENSMUST00000195202 803 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm43651-201ENSMUST00000199796 439 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm8209-201ENSMUST00000206386 553 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 AC139376.1-201ENSMUST00000220056 1250 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm23136-201ENSMUST00000083425 99 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a4A2AX52 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a4A2AX52 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm26015-201ENSMUST00000104402 125 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm13717-201ENSMUST00000119868 365 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm25360-201ENSMUST00000178786 191 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm37652-201ENSMUST00000195290 2095 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm45246-201ENSMUST00000210820 367 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Gm18585-201ENSMUST00000215197 556 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.52□□□□□ -2.01
Col6a4A2AX52 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col6a4A2AX52 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Gm44675-201ENSMUST00000208188 2927 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 AC156560.3-201ENSMUST00000222978 3841 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Gm12467-201ENSMUST00000117625 745 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Gm12878-201ENSMUST00000118744 332 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Gm24937-201ENSMUST00000122597 134 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Snord92-201ENSMUST00000175548 85 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Gm16445-201ENSMUST00000120399 714 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Gm13788-201ENSMUST00000120767 601 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Gm25642-201ENSMUST00000175137 66 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Gm28594-201ENSMUST00000187022 661 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.51□□□□□ -2.01
Col6a4A2AX52 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col6a4A2AX52 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a4A2AX52 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a4A2AX52 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Col6a4A2AX52 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a4A2AX52 Gm25466-201ENSMUST00000103995 132 ntBASIC2.5□□□□□ -2.01
Col6a4A2AX52 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.5□□□□□ -2.01
Col6a4A2AX52 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.5□□□□□ -2.01
Col6a4A2AX52 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.5□□□□□ -2.01
Col6a4A2AX52 Gm28877-201ENSMUST00000191349 604 ntBASIC2.5□□□□□ -2.01
Col6a4A2AX52 Gm44519-201ENSMUST00000206486 122 ntBASIC2.5□□□□□ -2.01
Col6a4A2AX52 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a4A2AX52 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a4A2AX52 AC161520.1-201ENSMUST00000210954 939 ntBASIC2.5□□□□□ -2.01
Col6a4A2AX52 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a4A2AX52 Gm24950-201ENSMUST00000082768 191 ntBASIC2.5□□□□□ -2.01
Col6a4A2AX52 Gm23971-201ENSMUST00000083317 191 ntBASIC2.5□□□□□ -2.01
Col6a4A2AX52 Gm23849-201ENSMUST00000083833 191 ntBASIC2.5□□□□□ -2.01
Col6a4A2AX52 Gm26316-201ENSMUST00000083886 191 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms