Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gm3123-201ENSMUST00000163480 480 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Mir6413-201ENSMUST00000184049 108 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gm18406-201ENSMUST00000185872 669 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gm6680-201ENSMUST00000192789 950 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 AC159246.1-201ENSMUST00000214478 249 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 AC122465.3-201ENSMUST00000221644 355 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 CT030166.1-201ENSMUST00000222654 357 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gm25202-201ENSMUST00000082838 191 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 AC161254.1-201ENSMUST00000220310 3842 ntBASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-6A0A075B603 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.4□□□□□ -2.02
Trav6-6A0A075B603 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.4□□□□□ -2.02
Trav6-6A0A075B603 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Trav6-6A0A075B603 Mir690-201ENSMUST00000102110 109 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Mir291a-201ENSMUST00000104815 82 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm11433-201ENSMUST00000118318 228 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm11625-201ENSMUST00000119535 296 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm12880-201ENSMUST00000120652 494 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm11385-201ENSMUST00000121513 570 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm22226-201ENSMUST00000157355 109 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm27592-201ENSMUST00000157729 126 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm22174-201ENSMUST00000175050 125 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm22692-201ENSMUST00000175055 125 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm27634-201ENSMUST00000175060 126 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm22460-201ENSMUST00000175269 124 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm25535-201ENSMUST00000175364 125 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm24365-201ENSMUST00000175384 125 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm44310-201ENSMUST00000175424 126 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm22639-201ENSMUST00000175591 125 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm24979-201ENSMUST00000178626 126 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm27743-201ENSMUST00000185136 126 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm28785-201ENSMUST00000187478 379 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm17781-201ENSMUST00000195232 649 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm45072-201ENSMUST00000208673 929 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm18899-201ENSMUST00000217663 546 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm7119-201ENSMUST00000221345 695 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm24917-201ENSMUST00000083935 104 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm42909-201ENSMUST00000196982 3619 ntBASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Trav6-6A0A075B603 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm43923-201ENSMUST00000203992 2911 ntBASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm5384-201ENSMUST00000120313 463 ntBASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm11446-201ENSMUST00000121319 866 ntBASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm22345-201ENSMUST00000122644 107 ntBASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm22986-201ENSMUST00000122753 130 ntBASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm14562-201ENSMUST00000129885 543 ntBASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm17194-201ENSMUST00000164610 348 ntBASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav6-6A0A075B603 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms