Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm26362-201ENSMUST00000158865 315 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm16326-201ENSMUST00000162843 414 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm22852-201ENSMUST00000177899 101 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm25121-201ENSMUST00000179846 79 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Mir6348-201ENSMUST00000183804 120 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm29429-201ENSMUST00000187071 121 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm28849-201ENSMUST00000188127 174 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm28330-201ENSMUST00000190353 171 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm43402-201ENSMUST00000197159 159 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm6615-201ENSMUST00000199426 631 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm43028-201ENSMUST00000202561 481 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm18468-201ENSMUST00000207321 369 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm18465-201ENSMUST00000207468 369 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm18458-201ENSMUST00000207908 369 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm45070-201ENSMUST00000208100 246 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm45739-201ENSMUST00000213094 388 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 AC165284.1-201ENSMUST00000228614 458 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm23625-201ENSMUST00000082457 100 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm22053-201ENSMUST00000083394 200 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Nubp1Q9R060 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Nubp1Q9R060 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
Nubp1Q9R060 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Nubp1Q9R060 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Nubp1Q9R060 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Nubp1Q9R060 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm12125-201ENSMUST00000117261 736 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm13265-201ENSMUST00000118090 421 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm16032-201ENSMUST00000118534 168 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm11506-201ENSMUST00000122414 470 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm22337-201ENSMUST00000157721 132 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm25459-201ENSMUST00000157953 114 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm37162-201ENSMUST00000191708 551 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm37601-201ENSMUST00000194922 394 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm44533-201ENSMUST00000207782 268 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm6303-201ENSMUST00000210123 471 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm35857-201ENSMUST00000212739 178 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm9795-201ENSMUST00000062156 693 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm36969-201ENSMUST00000194551 2809 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm8935-202ENSMUST00000105727 1959 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC5.58□□□□□ -1.52
Nubp1Q9R060 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nubp1Q9R060 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms